Gene : Medtr5g016330 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  859
Name:  ? Medtr5g016330 Secondary Identifier:  ? PAC:31085917
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g016330 0.5kb upstream 0.5kb upstream 1339 true chr5: 5848350-5849688 Medicago truncatula
Medtr5g016330 0.5kb upstream 0.5kb upstream 500 false chr5: 5849189-5849688 Medicago truncatula
Medtr5g016330 0.5kb downstream 0.5kb downstream 1339 true chr5: 5847850-5849188 Medicago truncatula
Medtr5g016330 0.5kb downstream 0.5kb downstream 500 false chr5: 5847850-5848349 Medicago truncatula
Medtr5g016330 1.0kb upstream 1.0kb upstream 1839 true chr5: 5848350-5850188 Medicago truncatula
Medtr5g016330 1.0kb upstream 1.0kb upstream 1000 false chr5: 5849189-5850188 Medicago truncatula
Medtr5g016330 1.0kb downstream 1.0kb downstream 1839 true chr5: 5847350-5849188 Medicago truncatula
Medtr5g016330 1.0kb downstream 1.0kb downstream 1000 false chr5: 5847350-5848349 Medicago truncatula
Medtr5g016330 2.0kb upstream 2.0kb upstream 2839 true chr5: 5848350-5851188 Medicago truncatula
Medtr5g016330 2.0kb upstream 2.0kb upstream 2000 false chr5: 5849189-5851188 Medicago truncatula
Medtr5g016330 2.0kb downstream 2.0kb downstream 2839 true chr5: 5846350-5849188 Medicago truncatula
Medtr5g016330 2.0kb downstream 2.0kb downstream 2000 false chr5: 5846350-5848349 Medicago truncatula
Medtr5g016330 5.0kb upstream 5.0kb upstream 5839 true chr5: 5848350-5854188 Medicago truncatula
Medtr5g016330 5.0kb upstream 5.0kb upstream 5000 false chr5: 5849189-5854188 Medicago truncatula
Medtr5g016330 5.0kb downstream 5.0kb downstream 5839 true chr5: 5843350-5849188 Medicago truncatula
Medtr5g016330 5.0kb downstream 5.0kb downstream 5000 false chr5: 5843350-5848349 Medicago truncatula
Medtr5g016330 10.0kb upstream 10.0kb upstream 10839 true chr5: 5848350-5859188 Medicago truncatula
Medtr5g016330 10.0kb upstream 10.0kb upstream 10000 false chr5: 5849189-5859188 Medicago truncatula
Medtr5g016330 10.0kb downstream 10.0kb downstream 10839 true chr5: 5838350-5849188 Medicago truncatula
Medtr5g016330 10.0kb downstream 10.0kb downstream 10000 false chr5: 5838350-5848349 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312320 5265 Fabidae View MSA
124073761 5270 Rosid View MSA
123742798 5271 Pentapetalae View MSA
122793453 5272 Eudicot View MSA
122048539 5273 Angiosperm View MSA
121350224 5274 Embryophyte View MSA
123381631 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.089       Low
cufflinks 6.301        
cufflinks 6.125        
cufflinks 10.867     High High
cufflinks 11.142     High High
cufflinks 3.538       Low
cufflinks 6.169        
cufflinks 5.299        
cufflinks 12.543     High High

0 Strain