Gene : Medtr5g016370 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR22846 - WD40 REPEAT PROTEIN Description:  transducin family protein/WD-40 repeat protein
Genomic Order:  861 Name:  ? Medtr5g016370
Secondary Identifier:  ? PAC:31086546
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g016370 0.5kb upstream 0.5kb upstream 8629 true chr5: 5866099-5874727 Medicago truncatula
Medtr5g016370 0.5kb upstream 0.5kb upstream 500 false chr5: 5874228-5874727 Medicago truncatula
Medtr5g016370 0.5kb downstream 0.5kb downstream 8629 true chr5: 5865599-5874227 Medicago truncatula
Medtr5g016370 0.5kb downstream 0.5kb downstream 500 false chr5: 5865599-5866098 Medicago truncatula
Medtr5g016370 1.0kb upstream 1.0kb upstream 9129 true chr5: 5866099-5875227 Medicago truncatula
Medtr5g016370 1.0kb upstream 1.0kb upstream 1000 false chr5: 5874228-5875227 Medicago truncatula
Medtr5g016370 1.0kb downstream 1.0kb downstream 9129 true chr5: 5865099-5874227 Medicago truncatula
Medtr5g016370 1.0kb downstream 1.0kb downstream 1000 false chr5: 5865099-5866098 Medicago truncatula
Medtr5g016370 2.0kb upstream 2.0kb upstream 10129 true chr5: 5866099-5876227 Medicago truncatula
Medtr5g016370 2.0kb upstream 2.0kb upstream 2000 false chr5: 5874228-5876227 Medicago truncatula
Medtr5g016370 2.0kb downstream 2.0kb downstream 10129 true chr5: 5864099-5874227 Medicago truncatula
Medtr5g016370 2.0kb downstream 2.0kb downstream 2000 false chr5: 5864099-5866098 Medicago truncatula
Medtr5g016370 5.0kb upstream 5.0kb upstream 13129 true chr5: 5866099-5879227 Medicago truncatula
Medtr5g016370 5.0kb upstream 5.0kb upstream 5000 false chr5: 5874228-5879227 Medicago truncatula
Medtr5g016370 5.0kb downstream 5.0kb downstream 13129 true chr5: 5861099-5874227 Medicago truncatula
Medtr5g016370 5.0kb downstream 5.0kb downstream 5000 false chr5: 5861099-5866098 Medicago truncatula
Medtr5g016370 10.0kb upstream 10.0kb upstream 18129 true chr5: 5866099-5884227 Medicago truncatula
Medtr5g016370 10.0kb upstream 10.0kb upstream 10000 false chr5: 5874228-5884227 Medicago truncatula
Medtr5g016370 10.0kb downstream 10.0kb downstream 18129 true chr5: 5856099-5874227 Medicago truncatula
Medtr5g016370 10.0kb downstream 10.0kb downstream 10000 false chr5: 5856099-5866098 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310546 5265 Fabidae View MSA
124060920 5270 Rosid View MSA
123745818 5271 Pentapetalae View MSA
122787360 5272 Eudicot View MSA
122041857 5273 Angiosperm View MSA
121347223 5274 Embryophyte View MSA
123428047 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.044       High
cufflinks 1.702        
cufflinks 2.732        
cufflinks 0.747       Low
cufflinks 2.436        
cufflinks 0.704       Low
cufflinks 2.162        
cufflinks 2.157        
cufflinks 1.295        

0 Strain