Gene : Medtr4g134620 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12696 - TIP120 Description:  cullin-associated NEDD8-dissociated protein
Genomic Order:  7296 Name:  ? Medtr4g134620
Secondary Identifier:  ? PAC:31109319
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g134620 0.5kb upstream 0.5kb upstream 11938 true chr4: 56404901-56416838 Medicago truncatula
Medtr4g134620 0.5kb upstream 0.5kb upstream 500 false chr4: 56404901-56405400 Medicago truncatula
Medtr4g134620 0.5kb downstream 0.5kb downstream 11938 true chr4: 56405401-56417338 Medicago truncatula
Medtr4g134620 0.5kb downstream 0.5kb downstream 500 false chr4: 56416839-56417338 Medicago truncatula
Medtr4g134620 1.0kb upstream 1.0kb upstream 12438 true chr4: 56404401-56416838 Medicago truncatula
Medtr4g134620 1.0kb upstream 1.0kb upstream 1000 false chr4: 56404401-56405400 Medicago truncatula
Medtr4g134620 1.0kb downstream 1.0kb downstream 12438 true chr4: 56405401-56417838 Medicago truncatula
Medtr4g134620 1.0kb downstream 1.0kb downstream 1000 false chr4: 56416839-56417838 Medicago truncatula
Medtr4g134620 2.0kb upstream 2.0kb upstream 13438 true chr4: 56403401-56416838 Medicago truncatula
Medtr4g134620 2.0kb upstream 2.0kb upstream 2000 false chr4: 56403401-56405400 Medicago truncatula
Medtr4g134620 2.0kb downstream 2.0kb downstream 13438 true chr4: 56405401-56418838 Medicago truncatula
Medtr4g134620 2.0kb downstream 2.0kb downstream 2000 false chr4: 56416839-56418838 Medicago truncatula
Medtr4g134620 5.0kb upstream 5.0kb upstream 16438 true chr4: 56400401-56416838 Medicago truncatula
Medtr4g134620 5.0kb upstream 5.0kb upstream 5000 false chr4: 56400401-56405400 Medicago truncatula
Medtr4g134620 5.0kb downstream 5.0kb downstream 16438 true chr4: 56405401-56421838 Medicago truncatula
Medtr4g134620 5.0kb downstream 5.0kb downstream 5000 false chr4: 56416839-56421838 Medicago truncatula
Medtr4g134620 10.0kb upstream 10.0kb upstream 21438 true chr4: 56395401-56416838 Medicago truncatula
Medtr4g134620 10.0kb upstream 10.0kb upstream 10000 false chr4: 56395401-56405400 Medicago truncatula
Medtr4g134620 10.0kb downstream 10.0kb downstream 21438 true chr4: 56405401-56426838 Medicago truncatula
Medtr4g134620 10.0kb downstream 10.0kb downstream 10000 false chr4: 56416839-56426838 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299813 5265 Fabidae View MSA
124064777 5270 Rosid View MSA
123736693 5271 Pentapetalae View MSA
122792055 5272 Eudicot View MSA
122049783 5273 Angiosperm View MSA
121344585 5274 Embryophyte View MSA
123423876 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.565        
cufflinks 3.446        
cufflinks 2.624        
cufflinks 1.276       Low
cufflinks 4.585       High
cufflinks 0.889       Low
cufflinks 2.108        
cufflinks 2.746        
cufflinks 3.133        

0 Strain