Gene : Medtr5g005030 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11076:SF33 - DNA POLYMERASE KAPPA Description:  DNA polymerase kappa protein
Genomic Order:  39 Name:  ? Medtr5g005030
Secondary Identifier:  ? PAC:31085256
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g005030 0.5kb upstream 0.5kb upstream 4961 true chr5: 309878-314838 Medicago truncatula
Medtr5g005030 0.5kb upstream 0.5kb upstream 500 false chr5: 314339-314838 Medicago truncatula
Medtr5g005030 0.5kb downstream 0.5kb downstream 4961 true chr5: 309378-314338 Medicago truncatula
Medtr5g005030 0.5kb downstream 0.5kb downstream 500 false chr5: 309378-309877 Medicago truncatula
Medtr5g005030 1.0kb upstream 1.0kb upstream 5461 true chr5: 309878-315338 Medicago truncatula
Medtr5g005030 1.0kb upstream 1.0kb upstream 1000 false chr5: 314339-315338 Medicago truncatula
Medtr5g005030 1.0kb downstream 1.0kb downstream 5461 true chr5: 308878-314338 Medicago truncatula
Medtr5g005030 1.0kb downstream 1.0kb downstream 1000 false chr5: 308878-309877 Medicago truncatula
Medtr5g005030 2.0kb upstream 2.0kb upstream 6461 true chr5: 309878-316338 Medicago truncatula
Medtr5g005030 2.0kb upstream 2.0kb upstream 2000 false chr5: 314339-316338 Medicago truncatula
Medtr5g005030 2.0kb downstream 2.0kb downstream 6461 true chr5: 307878-314338 Medicago truncatula
Medtr5g005030 2.0kb downstream 2.0kb downstream 2000 false chr5: 307878-309877 Medicago truncatula
Medtr5g005030 5.0kb upstream 5.0kb upstream 9461 true chr5: 309878-319338 Medicago truncatula
Medtr5g005030 5.0kb upstream 5.0kb upstream 5000 false chr5: 314339-319338 Medicago truncatula
Medtr5g005030 5.0kb downstream 5.0kb downstream 9461 true chr5: 304878-314338 Medicago truncatula
Medtr5g005030 5.0kb downstream 5.0kb downstream 5000 false chr5: 304878-309877 Medicago truncatula
Medtr5g005030 10.0kb upstream 10.0kb upstream 14461 true chr5: 309878-324338 Medicago truncatula
Medtr5g005030 10.0kb upstream 10.0kb upstream 10000 false chr5: 314339-324338 Medicago truncatula
Medtr5g005030 10.0kb downstream 10.0kb downstream 14461 true chr5: 299878-314338 Medicago truncatula
Medtr5g005030 10.0kb downstream 10.0kb downstream 10000 false chr5: 299878-309877 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299445 5265 Fabidae View MSA
124064491 5270 Rosid View MSA
123752653 5271 Pentapetalae View MSA
122794532 5272 Eudicot View MSA
122043377 5273 Angiosperm View MSA
121348384 5274 Embryophyte View MSA
123428686 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.044        
cufflinks 4.868        
cufflinks 5.134        
cufflinks 1.477       Low
cufflinks 3.691        
cufflinks 0.995       Low
cufflinks 3.979        
cufflinks 4.358        
cufflinks 2.69        

0 Strain