Gene : Medtr5g016570 M. truncatula Mt4.0v1
Defline:  (1 of 94) PF03140 - Plant protein of unknown function (DUF247) Description:  UPF0481 plant-like protein
Genomic Order:  873 Name:  ? Medtr5g016570
Secondary Identifier:  ? PAC:31087315
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g016570 0.5kb upstream 0.5kb upstream 2585 true chr5: 5953978-5956562 Medicago truncatula
Medtr5g016570 0.5kb upstream 0.5kb upstream 500 false chr5: 5956063-5956562 Medicago truncatula
Medtr5g016570 0.5kb downstream 0.5kb downstream 2585 true chr5: 5953478-5956062 Medicago truncatula
Medtr5g016570 0.5kb downstream 0.5kb downstream 500 false chr5: 5953478-5953977 Medicago truncatula
Medtr5g016570 1.0kb upstream 1.0kb upstream 3085 true chr5: 5953978-5957062 Medicago truncatula
Medtr5g016570 1.0kb upstream 1.0kb upstream 1000 false chr5: 5956063-5957062 Medicago truncatula
Medtr5g016570 1.0kb downstream 1.0kb downstream 3085 true chr5: 5952978-5956062 Medicago truncatula
Medtr5g016570 1.0kb downstream 1.0kb downstream 1000 false chr5: 5952978-5953977 Medicago truncatula
Medtr5g016570 2.0kb upstream 2.0kb upstream 4085 true chr5: 5953978-5958062 Medicago truncatula
Medtr5g016570 2.0kb upstream 2.0kb upstream 2000 false chr5: 5956063-5958062 Medicago truncatula
Medtr5g016570 2.0kb downstream 2.0kb downstream 4085 true chr5: 5951978-5956062 Medicago truncatula
Medtr5g016570 2.0kb downstream 2.0kb downstream 2000 false chr5: 5951978-5953977 Medicago truncatula
Medtr5g016570 5.0kb upstream 5.0kb upstream 7085 true chr5: 5953978-5961062 Medicago truncatula
Medtr5g016570 5.0kb upstream 5.0kb upstream 5000 false chr5: 5956063-5961062 Medicago truncatula
Medtr5g016570 5.0kb downstream 5.0kb downstream 7085 true chr5: 5948978-5956062 Medicago truncatula
Medtr5g016570 5.0kb downstream 5.0kb downstream 5000 false chr5: 5948978-5953977 Medicago truncatula
Medtr5g016570 10.0kb upstream 10.0kb upstream 12085 true chr5: 5953978-5966062 Medicago truncatula
Medtr5g016570 10.0kb upstream 10.0kb upstream 10000 false chr5: 5956063-5966062 Medicago truncatula
Medtr5g016570 10.0kb downstream 10.0kb downstream 12085 true chr5: 5943978-5956062 Medicago truncatula
Medtr5g016570 10.0kb downstream 10.0kb downstream 10000 false chr5: 5943978-5953977 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302230 5265 Fabidae View MSA
124064793 5270 Rosid View MSA
123737351 5271 Pentapetalae View MSA
122791166 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.296        
cufflinks 0.137        
cufflinks 0.054     Low Low
cufflinks 0.182        
cufflinks 0.276        
cufflinks 1.138       High
cufflinks 0.872        
cufflinks 0.082       Low
cufflinks 1.26       High

0 Strain