Gene : Medtr5g005380 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11139:SF9 - SERINE/THREONINE-PROTEIN KINASE MTOR Description:  Serine/Threonine-kinase TOR
Genomic Order:  50 Name:  ? Medtr5g005380
Secondary Identifier:  ? PAC:31086297
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g005380 0.5kb upstream 0.5kb upstream 34030 true chr5: 389766-423795 Medicago truncatula
Medtr5g005380 0.5kb upstream 0.5kb upstream 500 false chr5: 423296-423795 Medicago truncatula
Medtr5g005380 0.5kb downstream 0.5kb downstream 34030 true chr5: 389266-423295 Medicago truncatula
Medtr5g005380 0.5kb downstream 0.5kb downstream 500 false chr5: 389266-389765 Medicago truncatula
Medtr5g005380 1.0kb upstream 1.0kb upstream 34530 true chr5: 389766-424295 Medicago truncatula
Medtr5g005380 1.0kb upstream 1.0kb upstream 1000 false chr5: 423296-424295 Medicago truncatula
Medtr5g005380 1.0kb downstream 1.0kb downstream 34530 true chr5: 388766-423295 Medicago truncatula
Medtr5g005380 1.0kb downstream 1.0kb downstream 1000 false chr5: 388766-389765 Medicago truncatula
Medtr5g005380 2.0kb upstream 2.0kb upstream 35530 true chr5: 389766-425295 Medicago truncatula
Medtr5g005380 2.0kb upstream 2.0kb upstream 2000 false chr5: 423296-425295 Medicago truncatula
Medtr5g005380 2.0kb downstream 2.0kb downstream 35530 true chr5: 387766-423295 Medicago truncatula
Medtr5g005380 2.0kb downstream 2.0kb downstream 2000 false chr5: 387766-389765 Medicago truncatula
Medtr5g005380 5.0kb upstream 5.0kb upstream 38530 true chr5: 389766-428295 Medicago truncatula
Medtr5g005380 5.0kb upstream 5.0kb upstream 5000 false chr5: 423296-428295 Medicago truncatula
Medtr5g005380 5.0kb downstream 5.0kb downstream 38530 true chr5: 384766-423295 Medicago truncatula
Medtr5g005380 5.0kb downstream 5.0kb downstream 5000 false chr5: 384766-389765 Medicago truncatula
Medtr5g005380 10.0kb upstream 10.0kb upstream 43530 true chr5: 389766-433295 Medicago truncatula
Medtr5g005380 10.0kb upstream 10.0kb upstream 10000 false chr5: 423296-433295 Medicago truncatula
Medtr5g005380 10.0kb downstream 10.0kb downstream 43530 true chr5: 379766-423295 Medicago truncatula
Medtr5g005380 10.0kb downstream 10.0kb downstream 10000 false chr5: 379766-389765 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300589 5265 Fabidae View MSA
124067131 5270 Rosid View MSA
123738619 5271 Pentapetalae View MSA
122787164 5272 Eudicot View MSA
122042776 5273 Angiosperm View MSA
121350854 5274 Embryophyte View MSA
123426906 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.232        
cufflinks 4.658        
cufflinks 6.689       High
cufflinks 0.804       Low
cufflinks 5.485        
cufflinks 0.648       Low
cufflinks 1.998        
cufflinks 4.958        
cufflinks 2.188        

0 Strain