Gene : Medtr4g415390 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22950:SF256 - AUXIN TRANSPORTER PROTEIN 1-RELATED Description:  auxin influx transporter
Genomic Order:  610 Name:  ? Medtr4g415390
Secondary Identifier:  ? PAC:31106282
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g415390 0.5kb upstream 0.5kb upstream 8178 true chr4: 4530456-4538633 Medicago truncatula
Medtr4g415390 0.5kb upstream 0.5kb upstream 500 false chr4: 4530456-4530955 Medicago truncatula
Medtr4g415390 0.5kb downstream 0.5kb downstream 8178 true chr4: 4530956-4539133 Medicago truncatula
Medtr4g415390 0.5kb downstream 0.5kb downstream 500 false chr4: 4538634-4539133 Medicago truncatula
Medtr4g415390 1.0kb upstream 1.0kb upstream 8678 true chr4: 4529956-4538633 Medicago truncatula
Medtr4g415390 1.0kb upstream 1.0kb upstream 1000 false chr4: 4529956-4530955 Medicago truncatula
Medtr4g415390 1.0kb downstream 1.0kb downstream 8678 true chr4: 4530956-4539633 Medicago truncatula
Medtr4g415390 1.0kb downstream 1.0kb downstream 1000 false chr4: 4538634-4539633 Medicago truncatula
Medtr4g415390 2.0kb upstream 2.0kb upstream 9678 true chr4: 4528956-4538633 Medicago truncatula
Medtr4g415390 2.0kb upstream 2.0kb upstream 2000 false chr4: 4528956-4530955 Medicago truncatula
Medtr4g415390 2.0kb downstream 2.0kb downstream 9678 true chr4: 4530956-4540633 Medicago truncatula
Medtr4g415390 2.0kb downstream 2.0kb downstream 2000 false chr4: 4538634-4540633 Medicago truncatula
Medtr4g415390 5.0kb upstream 5.0kb upstream 12678 true chr4: 4525956-4538633 Medicago truncatula
Medtr4g415390 5.0kb upstream 5.0kb upstream 5000 false chr4: 4525956-4530955 Medicago truncatula
Medtr4g415390 5.0kb downstream 5.0kb downstream 12678 true chr4: 4530956-4543633 Medicago truncatula
Medtr4g415390 5.0kb downstream 5.0kb downstream 5000 false chr4: 4538634-4543633 Medicago truncatula
Medtr4g415390 10.0kb upstream 10.0kb upstream 17678 true chr4: 4520956-4538633 Medicago truncatula
Medtr4g415390 10.0kb upstream 10.0kb upstream 10000 false chr4: 4520956-4530955 Medicago truncatula
Medtr4g415390 10.0kb downstream 10.0kb downstream 17678 true chr4: 4530956-4548633 Medicago truncatula
Medtr4g415390 10.0kb downstream 10.0kb downstream 10000 false chr4: 4538634-4548633 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656526 5273 Angiosperm View MSA
122298823 5265 Fabidae View MSA
124036613 5270 Rosid View MSA
123609914 5271 Pentapetalae View MSA
122644552 5272 Eudicot View MSA
120928599 5274 Embryophyte View MSA
123427582 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.088       Low
cufflinks 1.099        
cufflinks 1.537        
cufflinks 0.12       Low
cufflinks 2.17       High
cufflinks 0.105     Low Low
cufflinks 0.223        
cufflinks 1.478        
cufflinks 0.48        

0 Strain