Gene : Medtr4g132890 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10655:SF20 - CARBOXYLESTERASE Description:  acyl-protein thioesterase, putative
Genomic Order:  7167 Name:  ? Medtr4g132890
Secondary Identifier:  ? PAC:31110495
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7409 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g132890 0.5kb upstream 0.5kb upstream 4737 true chr4: 55595752-55600488 Medicago truncatula
Medtr4g132890 0.5kb upstream 0.5kb upstream 500 false chr4: 55599989-55600488 Medicago truncatula
Medtr4g132890 0.5kb downstream 0.5kb downstream 4737 true chr4: 55595252-55599988 Medicago truncatula
Medtr4g132890 0.5kb downstream 0.5kb downstream 500 false chr4: 55595252-55595751 Medicago truncatula
Medtr4g132890 1.0kb upstream 1.0kb upstream 5237 true chr4: 55595752-55600988 Medicago truncatula
Medtr4g132890 1.0kb upstream 1.0kb upstream 1000 false chr4: 55599989-55600988 Medicago truncatula
Medtr4g132890 1.0kb downstream 1.0kb downstream 5237 true chr4: 55594752-55599988 Medicago truncatula
Medtr4g132890 1.0kb downstream 1.0kb downstream 1000 false chr4: 55594752-55595751 Medicago truncatula
Medtr4g132890 2.0kb upstream 2.0kb upstream 6237 true chr4: 55595752-55601988 Medicago truncatula
Medtr4g132890 2.0kb upstream 2.0kb upstream 2000 false chr4: 55599989-55601988 Medicago truncatula
Medtr4g132890 2.0kb downstream 2.0kb downstream 6237 true chr4: 55593752-55599988 Medicago truncatula
Medtr4g132890 2.0kb downstream 2.0kb downstream 2000 false chr4: 55593752-55595751 Medicago truncatula
Medtr4g132890 5.0kb upstream 5.0kb upstream 9237 true chr4: 55595752-55604988 Medicago truncatula
Medtr4g132890 5.0kb upstream 5.0kb upstream 5000 false chr4: 55599989-55604988 Medicago truncatula
Medtr4g132890 5.0kb downstream 5.0kb downstream 9237 true chr4: 55590752-55599988 Medicago truncatula
Medtr4g132890 5.0kb downstream 5.0kb downstream 5000 false chr4: 55590752-55595751 Medicago truncatula
Medtr4g132890 10.0kb upstream 10.0kb upstream 14237 true chr4: 55595752-55609988 Medicago truncatula
Medtr4g132890 10.0kb upstream 10.0kb upstream 10000 false chr4: 55599989-55609988 Medicago truncatula
Medtr4g132890 10.0kb downstream 10.0kb downstream 14237 true chr4: 55585752-55599988 Medicago truncatula
Medtr4g132890 10.0kb downstream 10.0kb downstream 10000 false chr4: 55585752-55595751 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306145 5265 Fabidae View MSA
124073611 5270 Rosid View MSA
123748884 5271 Pentapetalae View MSA
122786681 5272 Eudicot View MSA
122044912 5273 Angiosperm View MSA
121349351 5274 Embryophyte View MSA
123428773 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.141       Low
cufflinks 3.722        
cufflinks 4.122        
cufflinks 7.49       High
cufflinks 3.682        
cufflinks 4.806        
cufflinks 2.611       Low
cufflinks 3.414        
cufflinks 3.845        

0 Strain