Gene : Medtr4g132840 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11216//PTHR11216:SF76 - EH DOMAIN Description:  calcium-binding EF hand protein
Genomic Order:  7161 Name:  ? Medtr4g132840
Secondary Identifier:  ? PAC:31107241
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g132840 0.5kb upstream 0.5kb upstream 6228 true chr4: 55560997-55567224 Medicago truncatula
Medtr4g132840 0.5kb upstream 0.5kb upstream 500 false chr4: 55560997-55561496 Medicago truncatula
Medtr4g132840 0.5kb downstream 0.5kb downstream 6228 true chr4: 55561497-55567724 Medicago truncatula
Medtr4g132840 0.5kb downstream 0.5kb downstream 500 false chr4: 55567225-55567724 Medicago truncatula
Medtr4g132840 1.0kb upstream 1.0kb upstream 6728 true chr4: 55560497-55567224 Medicago truncatula
Medtr4g132840 1.0kb upstream 1.0kb upstream 1000 false chr4: 55560497-55561496 Medicago truncatula
Medtr4g132840 1.0kb downstream 1.0kb downstream 6728 true chr4: 55561497-55568224 Medicago truncatula
Medtr4g132840 1.0kb downstream 1.0kb downstream 1000 false chr4: 55567225-55568224 Medicago truncatula
Medtr4g132840 2.0kb upstream 2.0kb upstream 7728 true chr4: 55559497-55567224 Medicago truncatula
Medtr4g132840 2.0kb upstream 2.0kb upstream 2000 false chr4: 55559497-55561496 Medicago truncatula
Medtr4g132840 2.0kb downstream 2.0kb downstream 7728 true chr4: 55561497-55569224 Medicago truncatula
Medtr4g132840 2.0kb downstream 2.0kb downstream 2000 false chr4: 55567225-55569224 Medicago truncatula
Medtr4g132840 5.0kb upstream 5.0kb upstream 10728 true chr4: 55556497-55567224 Medicago truncatula
Medtr4g132840 5.0kb upstream 5.0kb upstream 5000 false chr4: 55556497-55561496 Medicago truncatula
Medtr4g132840 5.0kb downstream 5.0kb downstream 10728 true chr4: 55561497-55572224 Medicago truncatula
Medtr4g132840 5.0kb downstream 5.0kb downstream 5000 false chr4: 55567225-55572224 Medicago truncatula
Medtr4g132840 10.0kb upstream 10.0kb upstream 15728 true chr4: 55551497-55567224 Medicago truncatula
Medtr4g132840 10.0kb upstream 10.0kb upstream 10000 false chr4: 55551497-55561496 Medicago truncatula
Medtr4g132840 10.0kb downstream 10.0kb downstream 15728 true chr4: 55561497-55577224 Medicago truncatula
Medtr4g132840 10.0kb downstream 10.0kb downstream 10000 false chr4: 55567225-55577224 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310215 5265 Fabidae View MSA
124069320 5270 Rosid View MSA
123743696 5271 Pentapetalae View MSA
122797625 5272 Eudicot View MSA
122047763 5273 Angiosperm View MSA
123428944 5275 Viridiplantae View MSA
121344712 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.134       High
cufflinks 0.668        
cufflinks 0.62        
cufflinks 0.137       Low
cufflinks 1.412       High
cufflinks 0.327        
cufflinks 0.599        
cufflinks 0.451        
cufflinks 0.685        

0 Strain