Gene : Medtr4g132420 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13683//PTHR13683:SF364 - ASPARTYL PROTEASES Description:  fungal proteinase A, aspartic proteinase superfamily protein
Genomic Order:  7131 Name:  ? Medtr4g132420
Secondary Identifier:  ? PAC:31115214
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g132420 0.5kb upstream 0.5kb upstream 8994 true chr4: 55349221-55358214 Medicago truncatula
Medtr4g132420 0.5kb upstream 0.5kb upstream 500 false chr4: 55357715-55358214 Medicago truncatula
Medtr4g132420 0.5kb downstream 0.5kb downstream 8994 true chr4: 55348721-55357714 Medicago truncatula
Medtr4g132420 0.5kb downstream 0.5kb downstream 500 false chr4: 55348721-55349220 Medicago truncatula
Medtr4g132420 1.0kb upstream 1.0kb upstream 9494 true chr4: 55349221-55358714 Medicago truncatula
Medtr4g132420 1.0kb upstream 1.0kb upstream 1000 false chr4: 55357715-55358714 Medicago truncatula
Medtr4g132420 1.0kb downstream 1.0kb downstream 9494 true chr4: 55348221-55357714 Medicago truncatula
Medtr4g132420 1.0kb downstream 1.0kb downstream 1000 false chr4: 55348221-55349220 Medicago truncatula
Medtr4g132420 2.0kb upstream 2.0kb upstream 10494 true chr4: 55349221-55359714 Medicago truncatula
Medtr4g132420 2.0kb upstream 2.0kb upstream 2000 false chr4: 55357715-55359714 Medicago truncatula
Medtr4g132420 2.0kb downstream 2.0kb downstream 10494 true chr4: 55347221-55357714 Medicago truncatula
Medtr4g132420 2.0kb downstream 2.0kb downstream 2000 false chr4: 55347221-55349220 Medicago truncatula
Medtr4g132420 5.0kb upstream 5.0kb upstream 13494 true chr4: 55349221-55362714 Medicago truncatula
Medtr4g132420 5.0kb upstream 5.0kb upstream 5000 false chr4: 55357715-55362714 Medicago truncatula
Medtr4g132420 5.0kb downstream 5.0kb downstream 13494 true chr4: 55344221-55357714 Medicago truncatula
Medtr4g132420 5.0kb downstream 5.0kb downstream 5000 false chr4: 55344221-55349220 Medicago truncatula
Medtr4g132420 10.0kb upstream 10.0kb upstream 18494 true chr4: 55349221-55367714 Medicago truncatula
Medtr4g132420 10.0kb upstream 10.0kb upstream 10000 false chr4: 55357715-55367714 Medicago truncatula
Medtr4g132420 10.0kb downstream 10.0kb downstream 18494 true chr4: 55339221-55357714 Medicago truncatula
Medtr4g132420 10.0kb downstream 10.0kb downstream 10000 false chr4: 55339221-55349220 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122795495 5272 Eudicot View MSA
122312580 5265 Fabidae View MSA
124069001 5270 Rosid View MSA
123750418 5271 Pentapetalae View MSA
122045248 5273 Angiosperm View MSA
121346712 5274 Embryophyte View MSA
123428778 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.73       High
cufflinks 0.81        
cufflinks 0.674        
cufflinks 0.751        
cufflinks 0.674        
cufflinks 1.266        
cufflinks 2.077       High
cufflinks 0.687        
cufflinks 1.957       High

0 Strain