Gene : Medtr4g123600 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23068//PTHR23068:SF11 - DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED Description:  DNA methyltransferase, putative
Genomic Order:  6514 Name:  ? Medtr4g123600
Secondary Identifier:  ? PAC:31113278
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g123600 0.5kb upstream 0.5kb upstream 8151 true chr4: 50887895-50896045 Medicago truncatula
Medtr4g123600 0.5kb upstream 0.5kb upstream 500 false chr4: 50895546-50896045 Medicago truncatula
Medtr4g123600 0.5kb downstream 0.5kb downstream 8151 true chr4: 50887395-50895545 Medicago truncatula
Medtr4g123600 0.5kb downstream 0.5kb downstream 500 false chr4: 50887395-50887894 Medicago truncatula
Medtr4g123600 1.0kb upstream 1.0kb upstream 8651 true chr4: 50887895-50896545 Medicago truncatula
Medtr4g123600 1.0kb upstream 1.0kb upstream 1000 false chr4: 50895546-50896545 Medicago truncatula
Medtr4g123600 1.0kb downstream 1.0kb downstream 8651 true chr4: 50886895-50895545 Medicago truncatula
Medtr4g123600 1.0kb downstream 1.0kb downstream 1000 false chr4: 50886895-50887894 Medicago truncatula
Medtr4g123600 2.0kb upstream 2.0kb upstream 9651 true chr4: 50887895-50897545 Medicago truncatula
Medtr4g123600 2.0kb upstream 2.0kb upstream 2000 false chr4: 50895546-50897545 Medicago truncatula
Medtr4g123600 2.0kb downstream 2.0kb downstream 9651 true chr4: 50885895-50895545 Medicago truncatula
Medtr4g123600 2.0kb downstream 2.0kb downstream 2000 false chr4: 50885895-50887894 Medicago truncatula
Medtr4g123600 5.0kb upstream 5.0kb upstream 12651 true chr4: 50887895-50900545 Medicago truncatula
Medtr4g123600 5.0kb upstream 5.0kb upstream 5000 false chr4: 50895546-50900545 Medicago truncatula
Medtr4g123600 5.0kb downstream 5.0kb downstream 12651 true chr4: 50882895-50895545 Medicago truncatula
Medtr4g123600 5.0kb downstream 5.0kb downstream 5000 false chr4: 50882895-50887894 Medicago truncatula
Medtr4g123600 10.0kb upstream 10.0kb upstream 17651 true chr4: 50887895-50905545 Medicago truncatula
Medtr4g123600 10.0kb upstream 10.0kb upstream 10000 false chr4: 50895546-50905545 Medicago truncatula
Medtr4g123600 10.0kb downstream 10.0kb downstream 17651 true chr4: 50877895-50895545 Medicago truncatula
Medtr4g123600 10.0kb downstream 10.0kb downstream 10000 false chr4: 50877895-50887894 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304849 5265 Fabidae View MSA
124066884 5270 Rosid View MSA
123739152 5271 Pentapetalae View MSA
122785997 5272 Eudicot View MSA
122049231 5273 Angiosperm View MSA
121350699 5274 Embryophyte View MSA
123381851 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.003        
cufflinks 3.288        
cufflinks 6.003       High
cufflinks 2.154       Low
cufflinks 4.499        
cufflinks 1.734       Low
cufflinks 3.795        
cufflinks 4.506        
cufflinks 2.777        

0 Strain