Gene : Medtr4g126950 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR32285:SF8 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 5 Description:  Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein
Genomic Order:  6742 Name:  ? Medtr4g126950
Secondary Identifier:  ? PAC:31111339
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g126950 0.5kb upstream 0.5kb upstream 6395 true chr4: 52610422-52616816 Medicago truncatula
Medtr4g126950 0.5kb upstream 0.5kb upstream 500 false chr4: 52610422-52610921 Medicago truncatula
Medtr4g126950 0.5kb downstream 0.5kb downstream 6395 true chr4: 52610922-52617316 Medicago truncatula
Medtr4g126950 0.5kb downstream 0.5kb downstream 500 false chr4: 52616817-52617316 Medicago truncatula
Medtr4g126950 1.0kb upstream 1.0kb upstream 6895 true chr4: 52609922-52616816 Medicago truncatula
Medtr4g126950 1.0kb upstream 1.0kb upstream 1000 false chr4: 52609922-52610921 Medicago truncatula
Medtr4g126950 1.0kb downstream 1.0kb downstream 6895 true chr4: 52610922-52617816 Medicago truncatula
Medtr4g126950 1.0kb downstream 1.0kb downstream 1000 false chr4: 52616817-52617816 Medicago truncatula
Medtr4g126950 2.0kb upstream 2.0kb upstream 7895 true chr4: 52608922-52616816 Medicago truncatula
Medtr4g126950 2.0kb upstream 2.0kb upstream 2000 false chr4: 52608922-52610921 Medicago truncatula
Medtr4g126950 2.0kb downstream 2.0kb downstream 7895 true chr4: 52610922-52618816 Medicago truncatula
Medtr4g126950 2.0kb downstream 2.0kb downstream 2000 false chr4: 52616817-52618816 Medicago truncatula
Medtr4g126950 5.0kb upstream 5.0kb upstream 10895 true chr4: 52605922-52616816 Medicago truncatula
Medtr4g126950 5.0kb upstream 5.0kb upstream 5000 false chr4: 52605922-52610921 Medicago truncatula
Medtr4g126950 5.0kb downstream 5.0kb downstream 10895 true chr4: 52610922-52621816 Medicago truncatula
Medtr4g126950 5.0kb downstream 5.0kb downstream 5000 false chr4: 52616817-52621816 Medicago truncatula
Medtr4g126950 10.0kb upstream 10.0kb upstream 15895 true chr4: 52600922-52616816 Medicago truncatula
Medtr4g126950 10.0kb upstream 10.0kb upstream 10000 false chr4: 52600922-52610921 Medicago truncatula
Medtr4g126950 10.0kb downstream 10.0kb downstream 15895 true chr4: 52610922-52626816 Medicago truncatula
Medtr4g126950 10.0kb downstream 10.0kb downstream 10000 false chr4: 52616817-52626816 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306135 5265 Fabidae View MSA
124064796 5270 Rosid View MSA
123739697 5271 Pentapetalae View MSA
122792275 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.792        
cufflinks 0.821        
cufflinks 0.981        
cufflinks 0.326       Low
cufflinks 0.964        
cufflinks 0.326       Low
cufflinks 0.66        
cufflinks 0.812        
cufflinks 0.554        

0 Strain