Gene : Medtr4g123930 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21262:SF12 - CA2+-ACTIVATED RELA/SPOT-LIKE PROTEIN Description:  Ca2+-activated RelA/SpoT-like protein
Genomic Order:  6542 Name:  ? Medtr4g123930
Secondary Identifier:  ? PAC:31112074
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g123930 0.5kb upstream 0.5kb upstream 3840 true chr4: 51091797-51095636 Medicago truncatula
Medtr4g123930 0.5kb upstream 0.5kb upstream 500 false chr4: 51091797-51092296 Medicago truncatula
Medtr4g123930 0.5kb downstream 0.5kb downstream 3840 true chr4: 51092297-51096136 Medicago truncatula
Medtr4g123930 0.5kb downstream 0.5kb downstream 500 false chr4: 51095637-51096136 Medicago truncatula
Medtr4g123930 1.0kb upstream 1.0kb upstream 4340 true chr4: 51091297-51095636 Medicago truncatula
Medtr4g123930 1.0kb upstream 1.0kb upstream 1000 false chr4: 51091297-51092296 Medicago truncatula
Medtr4g123930 1.0kb downstream 1.0kb downstream 4340 true chr4: 51092297-51096636 Medicago truncatula
Medtr4g123930 1.0kb downstream 1.0kb downstream 1000 false chr4: 51095637-51096636 Medicago truncatula
Medtr4g123930 2.0kb upstream 2.0kb upstream 5340 true chr4: 51090297-51095636 Medicago truncatula
Medtr4g123930 2.0kb upstream 2.0kb upstream 2000 false chr4: 51090297-51092296 Medicago truncatula
Medtr4g123930 2.0kb downstream 2.0kb downstream 5340 true chr4: 51092297-51097636 Medicago truncatula
Medtr4g123930 2.0kb downstream 2.0kb downstream 2000 false chr4: 51095637-51097636 Medicago truncatula
Medtr4g123930 5.0kb upstream 5.0kb upstream 8340 true chr4: 51087297-51095636 Medicago truncatula
Medtr4g123930 5.0kb upstream 5.0kb upstream 5000 false chr4: 51087297-51092296 Medicago truncatula
Medtr4g123930 5.0kb downstream 5.0kb downstream 8340 true chr4: 51092297-51100636 Medicago truncatula
Medtr4g123930 5.0kb downstream 5.0kb downstream 5000 false chr4: 51095637-51100636 Medicago truncatula
Medtr4g123930 10.0kb upstream 10.0kb upstream 13340 true chr4: 51082297-51095636 Medicago truncatula
Medtr4g123930 10.0kb upstream 10.0kb upstream 10000 false chr4: 51082297-51092296 Medicago truncatula
Medtr4g123930 10.0kb downstream 10.0kb downstream 13340 true chr4: 51092297-51105636 Medicago truncatula
Medtr4g123930 10.0kb downstream 10.0kb downstream 10000 false chr4: 51095637-51105636 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300782 5265 Fabidae View MSA
124063676 5270 Rosid View MSA
123740387 5271 Pentapetalae View MSA
122793647 5272 Eudicot View MSA
122044373 5273 Angiosperm View MSA
121310285 5274 Embryophyte View MSA
123347812 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.44        
cufflinks 2.487       High
cufflinks 1.756        
cufflinks 0.147       Low
cufflinks 2.503       High
cufflinks 0.14     Low Low
cufflinks 0.413        
cufflinks 1.973        
cufflinks 0.462        

0 Strain