Gene : Medtr4g130490 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31807:SF2 - HAUS AUGMIN-LIKE COMPLEX SUBUNIT 8 Description:  DUF566 family protein
Genomic Order:  6974 Name:  ? Medtr4g130490
Secondary Identifier:  ? PAC:31111285
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g130490 0.5kb upstream 0.5kb upstream 8593 true chr4: 54366929-54375521 Medicago truncatula
Medtr4g130490 0.5kb upstream 0.5kb upstream 500 false chr4: 54366929-54367428 Medicago truncatula
Medtr4g130490 0.5kb downstream 0.5kb downstream 8593 true chr4: 54367429-54376021 Medicago truncatula
Medtr4g130490 0.5kb downstream 0.5kb downstream 500 false chr4: 54375522-54376021 Medicago truncatula
Medtr4g130490 1.0kb upstream 1.0kb upstream 9093 true chr4: 54366429-54375521 Medicago truncatula
Medtr4g130490 1.0kb upstream 1.0kb upstream 1000 false chr4: 54366429-54367428 Medicago truncatula
Medtr4g130490 1.0kb downstream 1.0kb downstream 9093 true chr4: 54367429-54376521 Medicago truncatula
Medtr4g130490 1.0kb downstream 1.0kb downstream 1000 false chr4: 54375522-54376521 Medicago truncatula
Medtr4g130490 2.0kb upstream 2.0kb upstream 10093 true chr4: 54365429-54375521 Medicago truncatula
Medtr4g130490 2.0kb upstream 2.0kb upstream 2000 false chr4: 54365429-54367428 Medicago truncatula
Medtr4g130490 2.0kb downstream 2.0kb downstream 10093 true chr4: 54367429-54377521 Medicago truncatula
Medtr4g130490 2.0kb downstream 2.0kb downstream 2000 false chr4: 54375522-54377521 Medicago truncatula
Medtr4g130490 5.0kb upstream 5.0kb upstream 13093 true chr4: 54362429-54375521 Medicago truncatula
Medtr4g130490 5.0kb upstream 5.0kb upstream 5000 false chr4: 54362429-54367428 Medicago truncatula
Medtr4g130490 5.0kb downstream 5.0kb downstream 13093 true chr4: 54367429-54380521 Medicago truncatula
Medtr4g130490 5.0kb downstream 5.0kb downstream 5000 false chr4: 54375522-54380521 Medicago truncatula
Medtr4g130490 10.0kb upstream 10.0kb upstream 18093 true chr4: 54357429-54375521 Medicago truncatula
Medtr4g130490 10.0kb upstream 10.0kb upstream 10000 false chr4: 54357429-54367428 Medicago truncatula
Medtr4g130490 10.0kb downstream 10.0kb downstream 18093 true chr4: 54367429-54385521 Medicago truncatula
Medtr4g130490 10.0kb downstream 10.0kb downstream 10000 false chr4: 54375522-54385521 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309736 5265 Fabidae View MSA
124066469 5270 Rosid View MSA
123747481 5271 Pentapetalae View MSA
122790294 5272 Eudicot View MSA
122050322 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.738       High
cufflinks 0.406        
cufflinks 0.406        
cufflinks 0.223        
cufflinks 0.395        
cufflinks 0.102     Low Low
cufflinks 0.282        
cufflinks 0.266        
cufflinks 0.268        

0 Strain