Gene : Medtr4g116070 M. truncatula Mt4.0v1
Defline:  (1 of 11) 3.2.1.167 - Baicalin-beta-D-glucuronidase / Baicalinase Description:  glycoside hydrolase family 79 amine-terminal domain protein
Genomic Order:  6103 Name:  ? Medtr4g116070
Secondary Identifier:  ? PAC:31106433
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7213 Medicago truncatula pathologic  
Mtruncatula PWY-7214 Medicago truncatula pathologic  
Mtruncatula PWY-7445 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g116070 0.5kb upstream 0.5kb upstream 3879 true chr4: 47988786-47992664 Medicago truncatula
Medtr4g116070 0.5kb upstream 0.5kb upstream 500 false chr4: 47992165-47992664 Medicago truncatula
Medtr4g116070 0.5kb downstream 0.5kb downstream 3879 true chr4: 47988286-47992164 Medicago truncatula
Medtr4g116070 0.5kb downstream 0.5kb downstream 500 false chr4: 47988286-47988785 Medicago truncatula
Medtr4g116070 1.0kb upstream 1.0kb upstream 4379 true chr4: 47988786-47993164 Medicago truncatula
Medtr4g116070 1.0kb upstream 1.0kb upstream 1000 false chr4: 47992165-47993164 Medicago truncatula
Medtr4g116070 1.0kb downstream 1.0kb downstream 4379 true chr4: 47987786-47992164 Medicago truncatula
Medtr4g116070 1.0kb downstream 1.0kb downstream 1000 false chr4: 47987786-47988785 Medicago truncatula
Medtr4g116070 2.0kb upstream 2.0kb upstream 5379 true chr4: 47988786-47994164 Medicago truncatula
Medtr4g116070 2.0kb upstream 2.0kb upstream 2000 false chr4: 47992165-47994164 Medicago truncatula
Medtr4g116070 2.0kb downstream 2.0kb downstream 5379 true chr4: 47986786-47992164 Medicago truncatula
Medtr4g116070 2.0kb downstream 2.0kb downstream 2000 false chr4: 47986786-47988785 Medicago truncatula
Medtr4g116070 5.0kb upstream 5.0kb upstream 8379 true chr4: 47988786-47997164 Medicago truncatula
Medtr4g116070 5.0kb upstream 5.0kb upstream 5000 false chr4: 47992165-47997164 Medicago truncatula
Medtr4g116070 5.0kb downstream 5.0kb downstream 8379 true chr4: 47983786-47992164 Medicago truncatula
Medtr4g116070 5.0kb downstream 5.0kb downstream 5000 false chr4: 47983786-47988785 Medicago truncatula
Medtr4g116070 10.0kb upstream 10.0kb upstream 13379 true chr4: 47988786-48002164 Medicago truncatula
Medtr4g116070 10.0kb upstream 10.0kb upstream 10000 false chr4: 47992165-48002164 Medicago truncatula
Medtr4g116070 10.0kb downstream 10.0kb downstream 13379 true chr4: 47978786-47992164 Medicago truncatula
Medtr4g116070 10.0kb downstream 10.0kb downstream 10000 false chr4: 47978786-47988785 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310880 5265 Fabidae View MSA
124063624 5270 Rosid View MSA
123745490 5271 Pentapetalae View MSA
122791250 5272 Eudicot View MSA
122042729 5273 Angiosperm View MSA
121348264 5274 Embryophyte View MSA
123380798 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.294       Low
cufflinks 5.254        
cufflinks 5.587        
cufflinks 0.465        
cufflinks 6.075        
cufflinks 0.228       Low
cufflinks 3.625        
cufflinks 4.742        
cufflinks 1.15        

0 Strain