Gene : Medtr4g116170 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG1947//KOG4308 - Leucine rich repeat proteins, some proteins contain F-box // LRR-containing protein Description:  F-box/LRR-like protein
Genomic Order:  6110 Name:  ? Medtr4g116170
Secondary Identifier:  ? PAC:31112273
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g116170 0.5kb upstream 0.5kb upstream 12007 true chr4: 48043973-48055979 Medicago truncatula
Medtr4g116170 0.5kb upstream 0.5kb upstream 500 false chr4: 48043973-48044472 Medicago truncatula
Medtr4g116170 0.5kb downstream 0.5kb downstream 12007 true chr4: 48044473-48056479 Medicago truncatula
Medtr4g116170 0.5kb downstream 0.5kb downstream 500 false chr4: 48055980-48056479 Medicago truncatula
Medtr4g116170 1.0kb upstream 1.0kb upstream 12507 true chr4: 48043473-48055979 Medicago truncatula
Medtr4g116170 1.0kb upstream 1.0kb upstream 1000 false chr4: 48043473-48044472 Medicago truncatula
Medtr4g116170 1.0kb downstream 1.0kb downstream 12507 true chr4: 48044473-48056979 Medicago truncatula
Medtr4g116170 1.0kb downstream 1.0kb downstream 1000 false chr4: 48055980-48056979 Medicago truncatula
Medtr4g116170 2.0kb upstream 2.0kb upstream 13507 true chr4: 48042473-48055979 Medicago truncatula
Medtr4g116170 2.0kb upstream 2.0kb upstream 2000 false chr4: 48042473-48044472 Medicago truncatula
Medtr4g116170 2.0kb downstream 2.0kb downstream 13507 true chr4: 48044473-48057979 Medicago truncatula
Medtr4g116170 2.0kb downstream 2.0kb downstream 2000 false chr4: 48055980-48057979 Medicago truncatula
Medtr4g116170 5.0kb upstream 5.0kb upstream 16507 true chr4: 48039473-48055979 Medicago truncatula
Medtr4g116170 5.0kb upstream 5.0kb upstream 5000 false chr4: 48039473-48044472 Medicago truncatula
Medtr4g116170 5.0kb downstream 5.0kb downstream 16507 true chr4: 48044473-48060979 Medicago truncatula
Medtr4g116170 5.0kb downstream 5.0kb downstream 5000 false chr4: 48055980-48060979 Medicago truncatula
Medtr4g116170 10.0kb upstream 10.0kb upstream 21507 true chr4: 48034473-48055979 Medicago truncatula
Medtr4g116170 10.0kb upstream 10.0kb upstream 10000 false chr4: 48034473-48044472 Medicago truncatula
Medtr4g116170 10.0kb downstream 10.0kb downstream 21507 true chr4: 48044473-48065979 Medicago truncatula
Medtr4g116170 10.0kb downstream 10.0kb downstream 10000 false chr4: 48055980-48065979 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306854 5265 Fabidae View MSA
124070907 5270 Rosid View MSA
123740831 5271 Pentapetalae View MSA
122787198 5272 Eudicot View MSA
122042006 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121344992 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.885        
cufflinks 11.837     High  
cufflinks 20.0     High High
cufflinks 4.661        
cufflinks 11.296     High  
cufflinks 2.75       Low
cufflinks 6.278        
cufflinks 15.448     High  
cufflinks 3.074       Low

0 Strain