Gene : Medtr4g118340 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13832:SF267 - PROTEIN PHOSPHATASE 1K, MITOCHONDRIAL Description:  phosphatase 2C family protein
Genomic Order:  6243 Name:  ? Medtr4g118340
Secondary Identifier:  ? PAC:31113889
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g118340 0.5kb upstream 0.5kb upstream 5453 true chr4: 49022734-49028186 Medicago truncatula
Medtr4g118340 0.5kb upstream 0.5kb upstream 500 false chr4: 49022734-49023233 Medicago truncatula
Medtr4g118340 0.5kb downstream 0.5kb downstream 5453 true chr4: 49023234-49028686 Medicago truncatula
Medtr4g118340 0.5kb downstream 0.5kb downstream 500 false chr4: 49028187-49028686 Medicago truncatula
Medtr4g118340 1.0kb upstream 1.0kb upstream 5953 true chr4: 49022234-49028186 Medicago truncatula
Medtr4g118340 1.0kb upstream 1.0kb upstream 1000 false chr4: 49022234-49023233 Medicago truncatula
Medtr4g118340 1.0kb downstream 1.0kb downstream 5953 true chr4: 49023234-49029186 Medicago truncatula
Medtr4g118340 1.0kb downstream 1.0kb downstream 1000 false chr4: 49028187-49029186 Medicago truncatula
Medtr4g118340 2.0kb upstream 2.0kb upstream 6953 true chr4: 49021234-49028186 Medicago truncatula
Medtr4g118340 2.0kb upstream 2.0kb upstream 2000 false chr4: 49021234-49023233 Medicago truncatula
Medtr4g118340 2.0kb downstream 2.0kb downstream 6953 true chr4: 49023234-49030186 Medicago truncatula
Medtr4g118340 2.0kb downstream 2.0kb downstream 2000 false chr4: 49028187-49030186 Medicago truncatula
Medtr4g118340 5.0kb upstream 5.0kb upstream 9953 true chr4: 49018234-49028186 Medicago truncatula
Medtr4g118340 5.0kb upstream 5.0kb upstream 5000 false chr4: 49018234-49023233 Medicago truncatula
Medtr4g118340 5.0kb downstream 5.0kb downstream 9953 true chr4: 49023234-49033186 Medicago truncatula
Medtr4g118340 5.0kb downstream 5.0kb downstream 5000 false chr4: 49028187-49033186 Medicago truncatula
Medtr4g118340 10.0kb upstream 10.0kb upstream 14953 true chr4: 49013234-49028186 Medicago truncatula
Medtr4g118340 10.0kb upstream 10.0kb upstream 10000 false chr4: 49013234-49023233 Medicago truncatula
Medtr4g118340 10.0kb downstream 10.0kb downstream 14953 true chr4: 49023234-49038186 Medicago truncatula
Medtr4g118340 10.0kb downstream 10.0kb downstream 10000 false chr4: 49028187-49038186 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297265 5265 Fabidae View MSA
124042708 5270 Rosid View MSA
123742743 5271 Pentapetalae View MSA
122796398 5272 Eudicot View MSA
122046531 5273 Angiosperm View MSA
121348551 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.332       High
cufflinks 2.02        
cufflinks 2.121        
cufflinks 0.969       Low
cufflinks 2.871        
cufflinks 1.067       Low
cufflinks 2.36        
cufflinks 2.382        
cufflinks 1.699        

0 Strain