Gene : Medtr4g118660 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR24078:SF224 - DNAJ DOMAIN-CONTAINING PROTEIN Description:  DnaJ heat shock amine-terminal domain protein
Genomic Order:  6266 Name:  ? Medtr4g118660
Secondary Identifier:  ? PAC:31109836
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g118660 0.5kb upstream 0.5kb upstream 3488 true chr4: 49154272-49157759 Medicago truncatula
Medtr4g118660 0.5kb upstream 0.5kb upstream 500 false chr4: 49157260-49157759 Medicago truncatula
Medtr4g118660 0.5kb downstream 0.5kb downstream 3488 true chr4: 49153772-49157259 Medicago truncatula
Medtr4g118660 0.5kb downstream 0.5kb downstream 500 false chr4: 49153772-49154271 Medicago truncatula
Medtr4g118660 1.0kb upstream 1.0kb upstream 3988 true chr4: 49154272-49158259 Medicago truncatula
Medtr4g118660 1.0kb upstream 1.0kb upstream 1000 false chr4: 49157260-49158259 Medicago truncatula
Medtr4g118660 1.0kb downstream 1.0kb downstream 3988 true chr4: 49153272-49157259 Medicago truncatula
Medtr4g118660 1.0kb downstream 1.0kb downstream 1000 false chr4: 49153272-49154271 Medicago truncatula
Medtr4g118660 2.0kb upstream 2.0kb upstream 4988 true chr4: 49154272-49159259 Medicago truncatula
Medtr4g118660 2.0kb upstream 2.0kb upstream 2000 false chr4: 49157260-49159259 Medicago truncatula
Medtr4g118660 2.0kb downstream 2.0kb downstream 4988 true chr4: 49152272-49157259 Medicago truncatula
Medtr4g118660 2.0kb downstream 2.0kb downstream 2000 false chr4: 49152272-49154271 Medicago truncatula
Medtr4g118660 5.0kb upstream 5.0kb upstream 7988 true chr4: 49154272-49162259 Medicago truncatula
Medtr4g118660 5.0kb upstream 5.0kb upstream 5000 false chr4: 49157260-49162259 Medicago truncatula
Medtr4g118660 5.0kb downstream 5.0kb downstream 7988 true chr4: 49149272-49157259 Medicago truncatula
Medtr4g118660 5.0kb downstream 5.0kb downstream 5000 false chr4: 49149272-49154271 Medicago truncatula
Medtr4g118660 10.0kb upstream 10.0kb upstream 12988 true chr4: 49154272-49167259 Medicago truncatula
Medtr4g118660 10.0kb upstream 10.0kb upstream 10000 false chr4: 49157260-49167259 Medicago truncatula
Medtr4g118660 10.0kb downstream 10.0kb downstream 12988 true chr4: 49144272-49157259 Medicago truncatula
Medtr4g118660 10.0kb downstream 10.0kb downstream 10000 false chr4: 49144272-49154271 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311588 5265 Fabidae View MSA
124073467 5270 Rosid View MSA
123743094 5271 Pentapetalae View MSA
122796940 5272 Eudicot View MSA
122050144 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121348216 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.817        
cufflinks 3.429        
cufflinks 4.043        
cufflinks 1.328        
cufflinks 4.728        
cufflinks 0.381       Low
cufflinks 2.761        
cufflinks 3.878        
cufflinks 3.0        

0 Strain