Gene : Medtr4g119280 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12506:SF27 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 34-RELATED Description:  zinc finger C-x8-C-x5-C-x3-H type protein
Genomic Order:  6303 Name:  ? Medtr4g119280
Secondary Identifier:  ? PAC:31112559
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g119280 0.5kb upstream 0.5kb upstream 4808 true chr4: 49390580-49395387 Medicago truncatula
Medtr4g119280 0.5kb upstream 0.5kb upstream 500 false chr4: 49394888-49395387 Medicago truncatula
Medtr4g119280 0.5kb downstream 0.5kb downstream 4808 true chr4: 49390080-49394887 Medicago truncatula
Medtr4g119280 0.5kb downstream 0.5kb downstream 500 false chr4: 49390080-49390579 Medicago truncatula
Medtr4g119280 1.0kb upstream 1.0kb upstream 5308 true chr4: 49390580-49395887 Medicago truncatula
Medtr4g119280 1.0kb upstream 1.0kb upstream 1000 false chr4: 49394888-49395887 Medicago truncatula
Medtr4g119280 1.0kb downstream 1.0kb downstream 5308 true chr4: 49389580-49394887 Medicago truncatula
Medtr4g119280 1.0kb downstream 1.0kb downstream 1000 false chr4: 49389580-49390579 Medicago truncatula
Medtr4g119280 2.0kb upstream 2.0kb upstream 6308 true chr4: 49390580-49396887 Medicago truncatula
Medtr4g119280 2.0kb upstream 2.0kb upstream 2000 false chr4: 49394888-49396887 Medicago truncatula
Medtr4g119280 2.0kb downstream 2.0kb downstream 6308 true chr4: 49388580-49394887 Medicago truncatula
Medtr4g119280 2.0kb downstream 2.0kb downstream 2000 false chr4: 49388580-49390579 Medicago truncatula
Medtr4g119280 5.0kb upstream 5.0kb upstream 9308 true chr4: 49390580-49399887 Medicago truncatula
Medtr4g119280 5.0kb upstream 5.0kb upstream 5000 false chr4: 49394888-49399887 Medicago truncatula
Medtr4g119280 5.0kb downstream 5.0kb downstream 9308 true chr4: 49385580-49394887 Medicago truncatula
Medtr4g119280 5.0kb downstream 5.0kb downstream 5000 false chr4: 49385580-49390579 Medicago truncatula
Medtr4g119280 10.0kb upstream 10.0kb upstream 14308 true chr4: 49390580-49404887 Medicago truncatula
Medtr4g119280 10.0kb upstream 10.0kb upstream 10000 false chr4: 49394888-49404887 Medicago truncatula
Medtr4g119280 10.0kb downstream 10.0kb downstream 14308 true chr4: 49380580-49394887 Medicago truncatula
Medtr4g119280 10.0kb downstream 10.0kb downstream 10000 false chr4: 49380580-49390579 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306866 5265 Fabidae View MSA
124065869 5270 Rosid View MSA
123744016 5271 Pentapetalae View MSA
122797715 5272 Eudicot View MSA
122047734 5273 Angiosperm View MSA
121348027 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.24       High
cufflinks 2.924        
cufflinks 2.447        
cufflinks 5.146        
cufflinks 2.26       Low
cufflinks 3.473        
cufflinks 5.611        
cufflinks 2.256       Low
cufflinks 6.697       High

0 Strain