Gene : Medtr4g121070 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11766 - TYROSYL-TRNA SYNTHETASE Description:  tyrosyl-tRNA synthetase
Genomic Order:  6407 Name:  ? Medtr4g121070
Secondary Identifier:  ? PAC:31107057
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula TRNA-CHARGING-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g121070 0.5kb upstream 0.5kb upstream 2513 true chr4: 50126504-50129016 Medicago truncatula
Medtr4g121070 0.5kb upstream 0.5kb upstream 500 false chr4: 50128517-50129016 Medicago truncatula
Medtr4g121070 0.5kb downstream 0.5kb downstream 2513 true chr4: 50126004-50128516 Medicago truncatula
Medtr4g121070 0.5kb downstream 0.5kb downstream 500 false chr4: 50126004-50126503 Medicago truncatula
Medtr4g121070 1.0kb upstream 1.0kb upstream 3013 true chr4: 50126504-50129516 Medicago truncatula
Medtr4g121070 1.0kb upstream 1.0kb upstream 1000 false chr4: 50128517-50129516 Medicago truncatula
Medtr4g121070 1.0kb downstream 1.0kb downstream 3013 true chr4: 50125504-50128516 Medicago truncatula
Medtr4g121070 1.0kb downstream 1.0kb downstream 1000 false chr4: 50125504-50126503 Medicago truncatula
Medtr4g121070 2.0kb upstream 2.0kb upstream 4013 true chr4: 50126504-50130516 Medicago truncatula
Medtr4g121070 2.0kb upstream 2.0kb upstream 2000 false chr4: 50128517-50130516 Medicago truncatula
Medtr4g121070 2.0kb downstream 2.0kb downstream 4013 true chr4: 50124504-50128516 Medicago truncatula
Medtr4g121070 2.0kb downstream 2.0kb downstream 2000 false chr4: 50124504-50126503 Medicago truncatula
Medtr4g121070 5.0kb upstream 5.0kb upstream 7013 true chr4: 50126504-50133516 Medicago truncatula
Medtr4g121070 5.0kb upstream 5.0kb upstream 5000 false chr4: 50128517-50133516 Medicago truncatula
Medtr4g121070 5.0kb downstream 5.0kb downstream 7013 true chr4: 50121504-50128516 Medicago truncatula
Medtr4g121070 5.0kb downstream 5.0kb downstream 5000 false chr4: 50121504-50126503 Medicago truncatula
Medtr4g121070 10.0kb upstream 10.0kb upstream 12013 true chr4: 50126504-50138516 Medicago truncatula
Medtr4g121070 10.0kb upstream 10.0kb upstream 10000 false chr4: 50128517-50138516 Medicago truncatula
Medtr4g121070 10.0kb downstream 10.0kb downstream 12013 true chr4: 50116504-50128516 Medicago truncatula
Medtr4g121070 10.0kb downstream 10.0kb downstream 10000 false chr4: 50116504-50126503 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311730 5265 Fabidae View MSA
124066531 5270 Rosid View MSA
123740976 5271 Pentapetalae View MSA
122788187 5272 Eudicot View MSA
122042111 5273 Angiosperm View MSA
121344516 5274 Embryophyte View MSA
123424944 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.891       Low
cufflinks 2.845        
cufflinks 2.885        
cufflinks 1.742        
cufflinks 4.575       High
cufflinks 0.789       Low
cufflinks 1.205        
cufflinks 2.509        
cufflinks 1.874        

0 Strain