Gene : Medtr5g019420 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR23068//PTHR23068:SF12 - DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED Description:  DNA (cytosine-5)-methyltransferase DRM1/2
Genomic Order:  1060 Name:  ? Medtr5g019420
Secondary Identifier:  ? PAC:31089439
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g019420 0.5kb upstream 0.5kb upstream 7432 true chr5: 7317799-7325230 Medicago truncatula
Medtr5g019420 0.5kb upstream 0.5kb upstream 500 false chr5: 7317799-7318298 Medicago truncatula
Medtr5g019420 0.5kb downstream 0.5kb downstream 7432 true chr5: 7318299-7325730 Medicago truncatula
Medtr5g019420 0.5kb downstream 0.5kb downstream 500 false chr5: 7325231-7325730 Medicago truncatula
Medtr5g019420 1.0kb upstream 1.0kb upstream 7932 true chr5: 7317299-7325230 Medicago truncatula
Medtr5g019420 1.0kb upstream 1.0kb upstream 1000 false chr5: 7317299-7318298 Medicago truncatula
Medtr5g019420 1.0kb downstream 1.0kb downstream 7932 true chr5: 7318299-7326230 Medicago truncatula
Medtr5g019420 1.0kb downstream 1.0kb downstream 1000 false chr5: 7325231-7326230 Medicago truncatula
Medtr5g019420 2.0kb upstream 2.0kb upstream 8932 true chr5: 7316299-7325230 Medicago truncatula
Medtr5g019420 2.0kb upstream 2.0kb upstream 2000 false chr5: 7316299-7318298 Medicago truncatula
Medtr5g019420 2.0kb downstream 2.0kb downstream 8932 true chr5: 7318299-7327230 Medicago truncatula
Medtr5g019420 2.0kb downstream 2.0kb downstream 2000 false chr5: 7325231-7327230 Medicago truncatula
Medtr5g019420 5.0kb upstream 5.0kb upstream 11932 true chr5: 7313299-7325230 Medicago truncatula
Medtr5g019420 5.0kb upstream 5.0kb upstream 5000 false chr5: 7313299-7318298 Medicago truncatula
Medtr5g019420 5.0kb downstream 5.0kb downstream 11932 true chr5: 7318299-7330230 Medicago truncatula
Medtr5g019420 5.0kb downstream 5.0kb downstream 5000 false chr5: 7325231-7330230 Medicago truncatula
Medtr5g019420 10.0kb upstream 10.0kb upstream 16932 true chr5: 7308299-7325230 Medicago truncatula
Medtr5g019420 10.0kb upstream 10.0kb upstream 10000 false chr5: 7308299-7318298 Medicago truncatula
Medtr5g019420 10.0kb downstream 10.0kb downstream 16932 true chr5: 7318299-7335230 Medicago truncatula
Medtr5g019420 10.0kb downstream 10.0kb downstream 10000 false chr5: 7325231-7335230 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311248 5265 Fabidae View MSA
124062012 5270 Rosid View MSA
123745189 5271 Pentapetalae View MSA
122788994 5272 Eudicot View MSA
122049231 5273 Angiosperm View MSA
121350699 5274 Embryophyte View MSA
123381851 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.243       High
cufflinks 0.531        
cufflinks 0.632        
cufflinks 0.032     Low Low
cufflinks 0.453        
cufflinks 0.072     Low Low
cufflinks 0.203        
cufflinks 0.577        
cufflinks 0.121        

0 Strain