Gene : Medtr5g019120 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR16201:SF43 - PQ-LOOP REPEAT FAMILY PROTEIN / TRANSMEMBRANE FAMILY PROTEIN Description:  PQ-loop protein/transmembrane family protein
Genomic Order:  1047 Name:  ? Medtr5g019120
Secondary Identifier:  ? PAC:31091737
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g019120 0.5kb upstream 0.5kb upstream 5137 true chr5: 7216709-7221845 Medicago truncatula
Medtr5g019120 0.5kb upstream 0.5kb upstream 500 false chr5: 7216709-7217208 Medicago truncatula
Medtr5g019120 0.5kb downstream 0.5kb downstream 5137 true chr5: 7217209-7222345 Medicago truncatula
Medtr5g019120 0.5kb downstream 0.5kb downstream 500 false chr5: 7221846-7222345 Medicago truncatula
Medtr5g019120 1.0kb upstream 1.0kb upstream 5637 true chr5: 7216209-7221845 Medicago truncatula
Medtr5g019120 1.0kb upstream 1.0kb upstream 1000 false chr5: 7216209-7217208 Medicago truncatula
Medtr5g019120 1.0kb downstream 1.0kb downstream 5637 true chr5: 7217209-7222845 Medicago truncatula
Medtr5g019120 1.0kb downstream 1.0kb downstream 1000 false chr5: 7221846-7222845 Medicago truncatula
Medtr5g019120 2.0kb upstream 2.0kb upstream 6637 true chr5: 7215209-7221845 Medicago truncatula
Medtr5g019120 2.0kb upstream 2.0kb upstream 2000 false chr5: 7215209-7217208 Medicago truncatula
Medtr5g019120 2.0kb downstream 2.0kb downstream 6637 true chr5: 7217209-7223845 Medicago truncatula
Medtr5g019120 2.0kb downstream 2.0kb downstream 2000 false chr5: 7221846-7223845 Medicago truncatula
Medtr5g019120 5.0kb upstream 5.0kb upstream 9637 true chr5: 7212209-7221845 Medicago truncatula
Medtr5g019120 5.0kb upstream 5.0kb upstream 5000 false chr5: 7212209-7217208 Medicago truncatula
Medtr5g019120 5.0kb downstream 5.0kb downstream 9637 true chr5: 7217209-7226845 Medicago truncatula
Medtr5g019120 5.0kb downstream 5.0kb downstream 5000 false chr5: 7221846-7226845 Medicago truncatula
Medtr5g019120 10.0kb upstream 10.0kb upstream 14637 true chr5: 7207209-7221845 Medicago truncatula
Medtr5g019120 10.0kb upstream 10.0kb upstream 10000 false chr5: 7207209-7217208 Medicago truncatula
Medtr5g019120 10.0kb downstream 10.0kb downstream 14637 true chr5: 7217209-7231845 Medicago truncatula
Medtr5g019120 10.0kb downstream 10.0kb downstream 10000 false chr5: 7221846-7231845 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314760 5265 Fabidae View MSA
124069228 5270 Rosid View MSA
123744314 5271 Pentapetalae View MSA
122789645 5272 Eudicot View MSA
122043599 5273 Angiosperm View MSA
121344706 5274 Embryophyte View MSA
123427265 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.592     High  
cufflinks 71.805     High  
cufflinks 126.192     High High
cufflinks 1.087       Low
cufflinks 13.683     High  
cufflinks 4.694        
cufflinks 7.467        
cufflinks 134.61     High High
cufflinks 1.251       Low

0 Strain