Gene : Medtr5g020230 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10071:SF156 - GATA TRANSCRIPTION FACTOR 18-RELATED Description:  GATA type zinc finger transcription factor family protein
Genomic Order:  1118 Name:  ? Medtr5g020230
Secondary Identifier:  ? PAC:31088515
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g020230 0.5kb upstream 0.5kb upstream 1614 true chr5: 7722473-7724086 Medicago truncatula
Medtr5g020230 0.5kb upstream 0.5kb upstream 500 false chr5: 7722473-7722972 Medicago truncatula
Medtr5g020230 0.5kb downstream 0.5kb downstream 1614 true chr5: 7722973-7724586 Medicago truncatula
Medtr5g020230 0.5kb downstream 0.5kb downstream 500 false chr5: 7724087-7724586 Medicago truncatula
Medtr5g020230 1.0kb upstream 1.0kb upstream 2114 true chr5: 7721973-7724086 Medicago truncatula
Medtr5g020230 1.0kb upstream 1.0kb upstream 1000 false chr5: 7721973-7722972 Medicago truncatula
Medtr5g020230 1.0kb downstream 1.0kb downstream 2114 true chr5: 7722973-7725086 Medicago truncatula
Medtr5g020230 1.0kb downstream 1.0kb downstream 1000 false chr5: 7724087-7725086 Medicago truncatula
Medtr5g020230 2.0kb upstream 2.0kb upstream 3114 true chr5: 7720973-7724086 Medicago truncatula
Medtr5g020230 2.0kb upstream 2.0kb upstream 2000 false chr5: 7720973-7722972 Medicago truncatula
Medtr5g020230 2.0kb downstream 2.0kb downstream 3114 true chr5: 7722973-7726086 Medicago truncatula
Medtr5g020230 2.0kb downstream 2.0kb downstream 2000 false chr5: 7724087-7726086 Medicago truncatula
Medtr5g020230 5.0kb upstream 5.0kb upstream 6114 true chr5: 7717973-7724086 Medicago truncatula
Medtr5g020230 5.0kb upstream 5.0kb upstream 5000 false chr5: 7717973-7722972 Medicago truncatula
Medtr5g020230 5.0kb downstream 5.0kb downstream 6114 true chr5: 7722973-7729086 Medicago truncatula
Medtr5g020230 5.0kb downstream 5.0kb downstream 5000 false chr5: 7724087-7729086 Medicago truncatula
Medtr5g020230 10.0kb upstream 10.0kb upstream 11114 true chr5: 7712973-7724086 Medicago truncatula
Medtr5g020230 10.0kb upstream 10.0kb upstream 10000 false chr5: 7712973-7722972 Medicago truncatula
Medtr5g020230 10.0kb downstream 10.0kb downstream 11114 true chr5: 7722973-7734086 Medicago truncatula
Medtr5g020230 10.0kb downstream 10.0kb downstream 10000 false chr5: 7724087-7734086 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305080 5265 Fabidae View MSA
124065468 5270 Rosid View MSA
123741718 5271 Pentapetalae View MSA
122796312 5272 Eudicot View MSA
122046709 5273 Angiosperm View MSA
121350500 5274 Embryophyte View MSA
123428177 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low Low
cufflinks 0.074     Low  
cufflinks 0.064     Low  
cufflinks 0.042     Low  
cufflinks 0.396       High
cufflinks 0.096        
cufflinks 0.028     Low Low
cufflinks 0.114        

0 Strain