Gene : Medtr5g024900 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22912//PTHR22912:SF183 - DISULFIDE OXIDOREDUCTASE Description:  thioredoxin reductase
Genomic Order:  1455 Name:  ? Medtr5g024900
Secondary Identifier:  ? PAC:31088756
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula THIOREDOX-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g024900 0.5kb upstream 0.5kb upstream 5180 true chr5: 10063838-10069017 Medicago truncatula
Medtr5g024900 0.5kb upstream 0.5kb upstream 500 false chr5: 10068518-10069017 Medicago truncatula
Medtr5g024900 0.5kb downstream 0.5kb downstream 5180 true chr5: 10063338-10068517 Medicago truncatula
Medtr5g024900 0.5kb downstream 0.5kb downstream 500 false chr5: 10063338-10063837 Medicago truncatula
Medtr5g024900 1.0kb upstream 1.0kb upstream 5680 true chr5: 10063838-10069517 Medicago truncatula
Medtr5g024900 1.0kb upstream 1.0kb upstream 1000 false chr5: 10068518-10069517 Medicago truncatula
Medtr5g024900 1.0kb downstream 1.0kb downstream 5680 true chr5: 10062838-10068517 Medicago truncatula
Medtr5g024900 1.0kb downstream 1.0kb downstream 1000 false chr5: 10062838-10063837 Medicago truncatula
Medtr5g024900 2.0kb upstream 2.0kb upstream 6680 true chr5: 10063838-10070517 Medicago truncatula
Medtr5g024900 2.0kb upstream 2.0kb upstream 2000 false chr5: 10068518-10070517 Medicago truncatula
Medtr5g024900 2.0kb downstream 2.0kb downstream 6680 true chr5: 10061838-10068517 Medicago truncatula
Medtr5g024900 2.0kb downstream 2.0kb downstream 2000 false chr5: 10061838-10063837 Medicago truncatula
Medtr5g024900 5.0kb upstream 5.0kb upstream 9680 true chr5: 10063838-10073517 Medicago truncatula
Medtr5g024900 5.0kb upstream 5.0kb upstream 5000 false chr5: 10068518-10073517 Medicago truncatula
Medtr5g024900 5.0kb downstream 5.0kb downstream 9680 true chr5: 10058838-10068517 Medicago truncatula
Medtr5g024900 5.0kb downstream 5.0kb downstream 5000 false chr5: 10058838-10063837 Medicago truncatula
Medtr5g024900 10.0kb upstream 10.0kb upstream 14680 true chr5: 10063838-10078517 Medicago truncatula
Medtr5g024900 10.0kb upstream 10.0kb upstream 10000 false chr5: 10068518-10078517 Medicago truncatula
Medtr5g024900 10.0kb downstream 10.0kb downstream 14680 true chr5: 10053838-10068517 Medicago truncatula
Medtr5g024900 10.0kb downstream 10.0kb downstream 10000 false chr5: 10053838-10063837 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307190 5265 Fabidae View MSA
124061396 5270 Rosid View MSA
123746891 5271 Pentapetalae View MSA
122793572 5272 Eudicot View MSA
122044945 5273 Angiosperm View MSA
121345859 5274 Embryophyte View MSA
123424818 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.927       Low
cufflinks 8.172        
cufflinks 6.554        
cufflinks 20.012     High High
cufflinks 8.762        
cufflinks 8.439        
cufflinks 10.962     High  
cufflinks 6.386        
cufflinks 24.862     High High

0 Strain