Gene : Medtr5g026680 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21596//PTHR21596:SF8 - RIBONUCLEASE P SUBUNIT P38 Description:  ribonuclease P protein subunit P38, related protein
Genomic Order:  1597 Name:  ? Medtr5g026680
Secondary Identifier:  ? PAC:31089280
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g026680 0.5kb upstream 0.5kb upstream 4375 true chr5: 11021568-11025942 Medicago truncatula
Medtr5g026680 0.5kb upstream 0.5kb upstream 500 false chr5: 11021568-11022067 Medicago truncatula
Medtr5g026680 0.5kb downstream 0.5kb downstream 4375 true chr5: 11022068-11026442 Medicago truncatula
Medtr5g026680 0.5kb downstream 0.5kb downstream 500 false chr5: 11025943-11026442 Medicago truncatula
Medtr5g026680 1.0kb upstream 1.0kb upstream 4875 true chr5: 11021068-11025942 Medicago truncatula
Medtr5g026680 1.0kb upstream 1.0kb upstream 1000 false chr5: 11021068-11022067 Medicago truncatula
Medtr5g026680 1.0kb downstream 1.0kb downstream 4875 true chr5: 11022068-11026942 Medicago truncatula
Medtr5g026680 1.0kb downstream 1.0kb downstream 1000 false chr5: 11025943-11026942 Medicago truncatula
Medtr5g026680 2.0kb upstream 2.0kb upstream 5875 true chr5: 11020068-11025942 Medicago truncatula
Medtr5g026680 2.0kb upstream 2.0kb upstream 2000 false chr5: 11020068-11022067 Medicago truncatula
Medtr5g026680 2.0kb downstream 2.0kb downstream 5875 true chr5: 11022068-11027942 Medicago truncatula
Medtr5g026680 2.0kb downstream 2.0kb downstream 2000 false chr5: 11025943-11027942 Medicago truncatula
Medtr5g026680 5.0kb upstream 5.0kb upstream 8875 true chr5: 11017068-11025942 Medicago truncatula
Medtr5g026680 5.0kb upstream 5.0kb upstream 5000 false chr5: 11017068-11022067 Medicago truncatula
Medtr5g026680 5.0kb downstream 5.0kb downstream 8875 true chr5: 11022068-11030942 Medicago truncatula
Medtr5g026680 5.0kb downstream 5.0kb downstream 5000 false chr5: 11025943-11030942 Medicago truncatula
Medtr5g026680 10.0kb upstream 10.0kb upstream 13875 true chr5: 11012068-11025942 Medicago truncatula
Medtr5g026680 10.0kb upstream 10.0kb upstream 10000 false chr5: 11012068-11022067 Medicago truncatula
Medtr5g026680 10.0kb downstream 10.0kb downstream 13875 true chr5: 11022068-11035942 Medicago truncatula
Medtr5g026680 10.0kb downstream 10.0kb downstream 10000 false chr5: 11025943-11035942 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049496 5273 Angiosperm View MSA
122309419 5265 Fabidae View MSA
124066774 5270 Rosid View MSA
123739600 5271 Pentapetalae View MSA
122788271 5272 Eudicot View MSA
121311438 5274 Embryophyte View MSA
123348734 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.501       High
cufflinks 3.24        
cufflinks 3.184        
cufflinks 1.179       Low
cufflinks 2.538        
cufflinks 1.228       Low
cufflinks 1.871        
cufflinks 3.147        
cufflinks 1.793        

0 Strain