Gene : Medtr5g022030 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24349:SF87 - CALCIUM-DEPENDENT PROTEIN KINASE 16-RELATED Description:  calcium-dependent kinase
Genomic Order:  1241 Name:  ? Medtr5g022030
Secondary Identifier:  ? PAC:31091524
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g022030 0.5kb upstream 0.5kb upstream 6560 true chr5: 8628390-8634949 Medicago truncatula
Medtr5g022030 0.5kb upstream 0.5kb upstream 500 false chr5: 8628390-8628889 Medicago truncatula
Medtr5g022030 0.5kb downstream 0.5kb downstream 6560 true chr5: 8628890-8635449 Medicago truncatula
Medtr5g022030 0.5kb downstream 0.5kb downstream 500 false chr5: 8634950-8635449 Medicago truncatula
Medtr5g022030 1.0kb upstream 1.0kb upstream 7060 true chr5: 8627890-8634949 Medicago truncatula
Medtr5g022030 1.0kb upstream 1.0kb upstream 1000 false chr5: 8627890-8628889 Medicago truncatula
Medtr5g022030 1.0kb downstream 1.0kb downstream 7060 true chr5: 8628890-8635949 Medicago truncatula
Medtr5g022030 1.0kb downstream 1.0kb downstream 1000 false chr5: 8634950-8635949 Medicago truncatula
Medtr5g022030 2.0kb upstream 2.0kb upstream 8060 true chr5: 8626890-8634949 Medicago truncatula
Medtr5g022030 2.0kb upstream 2.0kb upstream 2000 false chr5: 8626890-8628889 Medicago truncatula
Medtr5g022030 2.0kb downstream 2.0kb downstream 8060 true chr5: 8628890-8636949 Medicago truncatula
Medtr5g022030 2.0kb downstream 2.0kb downstream 2000 false chr5: 8634950-8636949 Medicago truncatula
Medtr5g022030 5.0kb upstream 5.0kb upstream 11060 true chr5: 8623890-8634949 Medicago truncatula
Medtr5g022030 5.0kb upstream 5.0kb upstream 5000 false chr5: 8623890-8628889 Medicago truncatula
Medtr5g022030 5.0kb downstream 5.0kb downstream 11060 true chr5: 8628890-8639949 Medicago truncatula
Medtr5g022030 5.0kb downstream 5.0kb downstream 5000 false chr5: 8634950-8639949 Medicago truncatula
Medtr5g022030 10.0kb upstream 10.0kb upstream 16060 true chr5: 8618890-8634949 Medicago truncatula
Medtr5g022030 10.0kb upstream 10.0kb upstream 10000 false chr5: 8618890-8628889 Medicago truncatula
Medtr5g022030 10.0kb downstream 10.0kb downstream 16060 true chr5: 8628890-8644949 Medicago truncatula
Medtr5g022030 10.0kb downstream 10.0kb downstream 10000 false chr5: 8634950-8644949 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299549 5265 Fabidae View MSA
124063775 5270 Rosid View MSA
123736489 5271 Pentapetalae View MSA
122791414 5272 Eudicot View MSA
122046992 5273 Angiosperm View MSA
121348543 5274 Embryophyte View MSA
123380907 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.115     High High
cufflinks 5.806        
cufflinks 9.171        
cufflinks 4.02       Low
cufflinks 5.604        
cufflinks 7.049        
cufflinks 11.61     High  
cufflinks 6.453        
cufflinks 15.613     High High

0 Strain