Gene : Medtr5g022130 M. truncatula Mt4.0v1
Defline:  (1 of 131) PTHR24078 - DNAJ HOMOLOG SUBFAMILY C MEMBER Description:  chaperone protein DnaJ 11
Genomic Order:  1247 Name:  ? Medtr5g022130
Secondary Identifier:  ? PAC:31085131
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g022130 0.5kb upstream 0.5kb upstream 1716 true chr5: 8695023-8696738 Medicago truncatula
Medtr5g022130 0.5kb upstream 0.5kb upstream 500 false chr5: 8695023-8695522 Medicago truncatula
Medtr5g022130 0.5kb downstream 0.5kb downstream 1716 true chr5: 8695523-8697238 Medicago truncatula
Medtr5g022130 0.5kb downstream 0.5kb downstream 500 false chr5: 8696739-8697238 Medicago truncatula
Medtr5g022130 1.0kb upstream 1.0kb upstream 2216 true chr5: 8694523-8696738 Medicago truncatula
Medtr5g022130 1.0kb upstream 1.0kb upstream 1000 false chr5: 8694523-8695522 Medicago truncatula
Medtr5g022130 1.0kb downstream 1.0kb downstream 2216 true chr5: 8695523-8697738 Medicago truncatula
Medtr5g022130 1.0kb downstream 1.0kb downstream 1000 false chr5: 8696739-8697738 Medicago truncatula
Medtr5g022130 2.0kb upstream 2.0kb upstream 3216 true chr5: 8693523-8696738 Medicago truncatula
Medtr5g022130 2.0kb upstream 2.0kb upstream 2000 false chr5: 8693523-8695522 Medicago truncatula
Medtr5g022130 2.0kb downstream 2.0kb downstream 3216 true chr5: 8695523-8698738 Medicago truncatula
Medtr5g022130 2.0kb downstream 2.0kb downstream 2000 false chr5: 8696739-8698738 Medicago truncatula
Medtr5g022130 5.0kb upstream 5.0kb upstream 6216 true chr5: 8690523-8696738 Medicago truncatula
Medtr5g022130 5.0kb upstream 5.0kb upstream 5000 false chr5: 8690523-8695522 Medicago truncatula
Medtr5g022130 5.0kb downstream 5.0kb downstream 6216 true chr5: 8695523-8701738 Medicago truncatula
Medtr5g022130 5.0kb downstream 5.0kb downstream 5000 false chr5: 8696739-8701738 Medicago truncatula
Medtr5g022130 10.0kb upstream 10.0kb upstream 11216 true chr5: 8685523-8696738 Medicago truncatula
Medtr5g022130 10.0kb upstream 10.0kb upstream 10000 false chr5: 8685523-8695522 Medicago truncatula
Medtr5g022130 10.0kb downstream 10.0kb downstream 11216 true chr5: 8695523-8706738 Medicago truncatula
Medtr5g022130 10.0kb downstream 10.0kb downstream 10000 false chr5: 8696739-8706738 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311545 5265 Fabidae View MSA
124071980 5270 Rosid View MSA
123753518 5271 Pentapetalae View MSA
122797813 5272 Eudicot View MSA
122049944 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121350989 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 161.326     High High
cufflinks 105.686     High  
cufflinks 99.608     High  
cufflinks 87.839     High  
cufflinks 90.65     High  
cufflinks 66.707     High Low
cufflinks 150.29     High High
cufflinks 126.349     High  
cufflinks 151.599     High High

0 Strain