Gene : Medtr5g022740 M. truncatula Mt4.0v1
Defline:  (1 of 492) PF01535 - PPR repeat (PPR) Description:  PPR containing plant-like protein
Genomic Order:  1292 Name:  ? Medtr5g022740
Secondary Identifier:  ? PAC:31087050
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g022740 0.5kb upstream 0.5kb upstream 4651 true chr5: 8995144-8999794 Medicago truncatula
Medtr5g022740 0.5kb upstream 0.5kb upstream 500 false chr5: 8999295-8999794 Medicago truncatula
Medtr5g022740 0.5kb downstream 0.5kb downstream 4651 true chr5: 8994644-8999294 Medicago truncatula
Medtr5g022740 0.5kb downstream 0.5kb downstream 500 false chr5: 8994644-8995143 Medicago truncatula
Medtr5g022740 1.0kb upstream 1.0kb upstream 5151 true chr5: 8995144-9000294 Medicago truncatula
Medtr5g022740 1.0kb upstream 1.0kb upstream 1000 false chr5: 8999295-9000294 Medicago truncatula
Medtr5g022740 1.0kb downstream 1.0kb downstream 5151 true chr5: 8994144-8999294 Medicago truncatula
Medtr5g022740 1.0kb downstream 1.0kb downstream 1000 false chr5: 8994144-8995143 Medicago truncatula
Medtr5g022740 2.0kb upstream 2.0kb upstream 6151 true chr5: 8995144-9001294 Medicago truncatula
Medtr5g022740 2.0kb upstream 2.0kb upstream 2000 false chr5: 8999295-9001294 Medicago truncatula
Medtr5g022740 2.0kb downstream 2.0kb downstream 6151 true chr5: 8993144-8999294 Medicago truncatula
Medtr5g022740 2.0kb downstream 2.0kb downstream 2000 false chr5: 8993144-8995143 Medicago truncatula
Medtr5g022740 5.0kb upstream 5.0kb upstream 9151 true chr5: 8995144-9004294 Medicago truncatula
Medtr5g022740 5.0kb upstream 5.0kb upstream 5000 false chr5: 8999295-9004294 Medicago truncatula
Medtr5g022740 5.0kb downstream 5.0kb downstream 9151 true chr5: 8990144-8999294 Medicago truncatula
Medtr5g022740 5.0kb downstream 5.0kb downstream 5000 false chr5: 8990144-8995143 Medicago truncatula
Medtr5g022740 10.0kb upstream 10.0kb upstream 14151 true chr5: 8995144-9009294 Medicago truncatula
Medtr5g022740 10.0kb upstream 10.0kb upstream 10000 false chr5: 8999295-9009294 Medicago truncatula
Medtr5g022740 10.0kb downstream 10.0kb downstream 14151 true chr5: 8985144-8999294 Medicago truncatula
Medtr5g022740 10.0kb downstream 10.0kb downstream 10000 false chr5: 8985144-8995143 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307062 5265 Fabidae View MSA
124051517 5270 Rosid View MSA
123741798 5271 Pentapetalae View MSA
122789514 5272 Eudicot View MSA
122049493 5273 Angiosperm View MSA
121311435 5274 Embryophyte View MSA
123348731 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.822        
cufflinks 0.864        
cufflinks 1.003        
cufflinks 0.301       Low
cufflinks 1.73       High
cufflinks 0.404       Low
cufflinks 0.591        
cufflinks 0.848        
cufflinks 0.529        

0 Strain