Gene : Medtr5g025310 M. truncatula Mt4.0v1
Defline:  (1 of 1) 6.3.4.13 - Phosphoribosylamine--glycine ligase / Phosphoribosylglycinamide synthetase Description:  phosphoribosylamine-glycine ligase
Genomic Order:  1489 Name:  ? Medtr5g025310
Secondary Identifier:  ? PAC:31090309
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6121 Medicago truncatula pathologic  
Mtruncatula PWY-841 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g025310 0.5kb upstream 0.5kb upstream 3807 true chr5: 10270550-10274356 Medicago truncatula
Medtr5g025310 0.5kb upstream 0.5kb upstream 500 false chr5: 10273857-10274356 Medicago truncatula
Medtr5g025310 0.5kb downstream 0.5kb downstream 3807 true chr5: 10270050-10273856 Medicago truncatula
Medtr5g025310 0.5kb downstream 0.5kb downstream 500 false chr5: 10270050-10270549 Medicago truncatula
Medtr5g025310 1.0kb upstream 1.0kb upstream 4307 true chr5: 10270550-10274856 Medicago truncatula
Medtr5g025310 1.0kb upstream 1.0kb upstream 1000 false chr5: 10273857-10274856 Medicago truncatula
Medtr5g025310 1.0kb downstream 1.0kb downstream 4307 true chr5: 10269550-10273856 Medicago truncatula
Medtr5g025310 1.0kb downstream 1.0kb downstream 1000 false chr5: 10269550-10270549 Medicago truncatula
Medtr5g025310 2.0kb upstream 2.0kb upstream 5307 true chr5: 10270550-10275856 Medicago truncatula
Medtr5g025310 2.0kb upstream 2.0kb upstream 2000 false chr5: 10273857-10275856 Medicago truncatula
Medtr5g025310 2.0kb downstream 2.0kb downstream 5307 true chr5: 10268550-10273856 Medicago truncatula
Medtr5g025310 2.0kb downstream 2.0kb downstream 2000 false chr5: 10268550-10270549 Medicago truncatula
Medtr5g025310 5.0kb upstream 5.0kb upstream 8307 true chr5: 10270550-10278856 Medicago truncatula
Medtr5g025310 5.0kb upstream 5.0kb upstream 5000 false chr5: 10273857-10278856 Medicago truncatula
Medtr5g025310 5.0kb downstream 5.0kb downstream 8307 true chr5: 10265550-10273856 Medicago truncatula
Medtr5g025310 5.0kb downstream 5.0kb downstream 5000 false chr5: 10265550-10270549 Medicago truncatula
Medtr5g025310 10.0kb upstream 10.0kb upstream 13307 true chr5: 10270550-10283856 Medicago truncatula
Medtr5g025310 10.0kb upstream 10.0kb upstream 10000 false chr5: 10273857-10283856 Medicago truncatula
Medtr5g025310 10.0kb downstream 10.0kb downstream 13307 true chr5: 10260550-10273856 Medicago truncatula
Medtr5g025310 10.0kb downstream 10.0kb downstream 10000 false chr5: 10260550-10270549 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307896 5265 Fabidae View MSA
124061886 5270 Rosid View MSA
123741670 5271 Pentapetalae View MSA
122788361 5272 Eudicot View MSA
122046368 5273 Angiosperm View MSA
121345557 5274 Embryophyte View MSA
123424132 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.264     High High
cufflinks 6.926        
cufflinks 9.771        
cufflinks 8.755        
cufflinks 9.928        
cufflinks 2.581       Low
cufflinks 5.849        
cufflinks 10.199     High  
cufflinks 4.634        

0 Strain