Gene : Medtr5g025560 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22990 - F-BOX ONLY PROTEIN Description:  F-box SKIP31-like protein
Genomic Order:  1507 Name:  ? Medtr5g025560
Secondary Identifier:  ? PAC:31086948
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g025560 0.5kb upstream 0.5kb upstream 4062 true chr5: 10372071-10376132 Medicago truncatula
Medtr5g025560 0.5kb upstream 0.5kb upstream 500 false chr5: 10372071-10372570 Medicago truncatula
Medtr5g025560 0.5kb downstream 0.5kb downstream 4062 true chr5: 10372571-10376632 Medicago truncatula
Medtr5g025560 0.5kb downstream 0.5kb downstream 500 false chr5: 10376133-10376632 Medicago truncatula
Medtr5g025560 1.0kb upstream 1.0kb upstream 4562 true chr5: 10371571-10376132 Medicago truncatula
Medtr5g025560 1.0kb upstream 1.0kb upstream 1000 false chr5: 10371571-10372570 Medicago truncatula
Medtr5g025560 1.0kb downstream 1.0kb downstream 4562 true chr5: 10372571-10377132 Medicago truncatula
Medtr5g025560 1.0kb downstream 1.0kb downstream 1000 false chr5: 10376133-10377132 Medicago truncatula
Medtr5g025560 2.0kb upstream 2.0kb upstream 5562 true chr5: 10370571-10376132 Medicago truncatula
Medtr5g025560 2.0kb upstream 2.0kb upstream 2000 false chr5: 10370571-10372570 Medicago truncatula
Medtr5g025560 2.0kb downstream 2.0kb downstream 5562 true chr5: 10372571-10378132 Medicago truncatula
Medtr5g025560 2.0kb downstream 2.0kb downstream 2000 false chr5: 10376133-10378132 Medicago truncatula
Medtr5g025560 5.0kb upstream 5.0kb upstream 8562 true chr5: 10367571-10376132 Medicago truncatula
Medtr5g025560 5.0kb upstream 5.0kb upstream 5000 false chr5: 10367571-10372570 Medicago truncatula
Medtr5g025560 5.0kb downstream 5.0kb downstream 8562 true chr5: 10372571-10381132 Medicago truncatula
Medtr5g025560 5.0kb downstream 5.0kb downstream 5000 false chr5: 10376133-10381132 Medicago truncatula
Medtr5g025560 10.0kb upstream 10.0kb upstream 13562 true chr5: 10362571-10376132 Medicago truncatula
Medtr5g025560 10.0kb upstream 10.0kb upstream 10000 false chr5: 10362571-10372570 Medicago truncatula
Medtr5g025560 10.0kb downstream 10.0kb downstream 13562 true chr5: 10372571-10386132 Medicago truncatula
Medtr5g025560 10.0kb downstream 10.0kb downstream 10000 false chr5: 10376133-10386132 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041271 5273 Angiosperm View MSA
122307369 5265 Fabidae View MSA
124064461 5270 Rosid View MSA
123751585 5271 Pentapetalae View MSA
122789418 5272 Eudicot View MSA
121344604 5274 Embryophyte View MSA
123428680 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.379       High
cufflinks 5.25       Low
cufflinks 7.687        
cufflinks 9.749     High High
cufflinks 5.437       Low
cufflinks 8.306        
cufflinks 6.831        
cufflinks 6.496        
cufflinks 7.597        

0 Strain