Gene : Medtr5g023830 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR10677 - UBIQUILIN Description:  ubiquitin 1, related protein
Genomic Order:  1374 Name:  ? Medtr5g023830
Secondary Identifier:  ? PAC:31086926
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g023830 0.5kb upstream 0.5kb upstream 7048 true chr5: 9488482-9495529 Medicago truncatula
Medtr5g023830 0.5kb upstream 0.5kb upstream 500 false chr5: 9488482-9488981 Medicago truncatula
Medtr5g023830 0.5kb downstream 0.5kb downstream 7048 true chr5: 9488982-9496029 Medicago truncatula
Medtr5g023830 0.5kb downstream 0.5kb downstream 500 false chr5: 9495530-9496029 Medicago truncatula
Medtr5g023830 1.0kb upstream 1.0kb upstream 7548 true chr5: 9487982-9495529 Medicago truncatula
Medtr5g023830 1.0kb upstream 1.0kb upstream 1000 false chr5: 9487982-9488981 Medicago truncatula
Medtr5g023830 1.0kb downstream 1.0kb downstream 7548 true chr5: 9488982-9496529 Medicago truncatula
Medtr5g023830 1.0kb downstream 1.0kb downstream 1000 false chr5: 9495530-9496529 Medicago truncatula
Medtr5g023830 2.0kb upstream 2.0kb upstream 8548 true chr5: 9486982-9495529 Medicago truncatula
Medtr5g023830 2.0kb upstream 2.0kb upstream 2000 false chr5: 9486982-9488981 Medicago truncatula
Medtr5g023830 2.0kb downstream 2.0kb downstream 8548 true chr5: 9488982-9497529 Medicago truncatula
Medtr5g023830 2.0kb downstream 2.0kb downstream 2000 false chr5: 9495530-9497529 Medicago truncatula
Medtr5g023830 5.0kb upstream 5.0kb upstream 11548 true chr5: 9483982-9495529 Medicago truncatula
Medtr5g023830 5.0kb upstream 5.0kb upstream 5000 false chr5: 9483982-9488981 Medicago truncatula
Medtr5g023830 5.0kb downstream 5.0kb downstream 11548 true chr5: 9488982-9500529 Medicago truncatula
Medtr5g023830 5.0kb downstream 5.0kb downstream 5000 false chr5: 9495530-9500529 Medicago truncatula
Medtr5g023830 10.0kb upstream 10.0kb upstream 16548 true chr5: 9478982-9495529 Medicago truncatula
Medtr5g023830 10.0kb upstream 10.0kb upstream 10000 false chr5: 9478982-9488981 Medicago truncatula
Medtr5g023830 10.0kb downstream 10.0kb downstream 16548 true chr5: 9488982-9505529 Medicago truncatula
Medtr5g023830 10.0kb downstream 10.0kb downstream 10000 false chr5: 9495530-9505529 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311885 5265 Fabidae View MSA
124065561 5270 Rosid View MSA
123740193 5271 Pentapetalae View MSA
122788711 5272 Eudicot View MSA
122045847 5273 Angiosperm View MSA
121343962 5274 Embryophyte View MSA
123426424 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.053        
cufflinks 3.395        
cufflinks 3.081        
cufflinks 3.017        
cufflinks 2.741        
cufflinks 1.53       Low
cufflinks 3.076        
cufflinks 2.943        
cufflinks 3.953       High

0 Strain