Gene : Medtr5g012930 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR23105//PTHR23105:SF55 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER Description:  ribosomal protein L1p/L10e family protein
Genomic Order:  632 Name:  ? Medtr5g012930
Secondary Identifier:  ? PAC:31085027
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g012930 0.5kb upstream 0.5kb upstream 3041 true chr5: 4012928-4015968 Medicago truncatula
Medtr5g012930 0.5kb upstream 0.5kb upstream 500 false chr5: 4015469-4015968 Medicago truncatula
Medtr5g012930 0.5kb downstream 0.5kb downstream 3041 true chr5: 4012428-4015468 Medicago truncatula
Medtr5g012930 0.5kb downstream 0.5kb downstream 500 false chr5: 4012428-4012927 Medicago truncatula
Medtr5g012930 1.0kb upstream 1.0kb upstream 3541 true chr5: 4012928-4016468 Medicago truncatula
Medtr5g012930 1.0kb upstream 1.0kb upstream 1000 false chr5: 4015469-4016468 Medicago truncatula
Medtr5g012930 1.0kb downstream 1.0kb downstream 3541 true chr5: 4011928-4015468 Medicago truncatula
Medtr5g012930 1.0kb downstream 1.0kb downstream 1000 false chr5: 4011928-4012927 Medicago truncatula
Medtr5g012930 2.0kb upstream 2.0kb upstream 4541 true chr5: 4012928-4017468 Medicago truncatula
Medtr5g012930 2.0kb upstream 2.0kb upstream 2000 false chr5: 4015469-4017468 Medicago truncatula
Medtr5g012930 2.0kb downstream 2.0kb downstream 4541 true chr5: 4010928-4015468 Medicago truncatula
Medtr5g012930 2.0kb downstream 2.0kb downstream 2000 false chr5: 4010928-4012927 Medicago truncatula
Medtr5g012930 5.0kb upstream 5.0kb upstream 7541 true chr5: 4012928-4020468 Medicago truncatula
Medtr5g012930 5.0kb upstream 5.0kb upstream 5000 false chr5: 4015469-4020468 Medicago truncatula
Medtr5g012930 5.0kb downstream 5.0kb downstream 7541 true chr5: 4007928-4015468 Medicago truncatula
Medtr5g012930 5.0kb downstream 5.0kb downstream 5000 false chr5: 4007928-4012927 Medicago truncatula
Medtr5g012930 10.0kb upstream 10.0kb upstream 12541 true chr5: 4012928-4025468 Medicago truncatula
Medtr5g012930 10.0kb upstream 10.0kb upstream 10000 false chr5: 4015469-4025468 Medicago truncatula
Medtr5g012930 10.0kb downstream 10.0kb downstream 12541 true chr5: 4002928-4015468 Medicago truncatula
Medtr5g012930 10.0kb downstream 10.0kb downstream 10000 false chr5: 4002928-4012927 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304338 5265 Fabidae View MSA
124062102 5270 Rosid View MSA
123750520 5271 Pentapetalae View MSA
122788879 5272 Eudicot View MSA
122041557 5273 Angiosperm View MSA
121346293 5274 Embryophyte View MSA
123424403 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.635        
cufflinks 6.654        
cufflinks 5.409       Low
cufflinks 8.251        
cufflinks 13.163     High High
cufflinks 5.438       Low
cufflinks 14.936     High High
cufflinks 6.567        
cufflinks 15.475     High High

0 Strain