Gene : Medtr5g013790 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10046:SF24 - LON PROTEASE HOMOLOG 2, PEROXISOMAL Description:  lon-related ATP-dependent protease, putative
Genomic Order:  699 Name:  ? Medtr5g013790
Secondary Identifier:  ? PAC:31087066
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g013790 0.5kb upstream 0.5kb upstream 10372 true chr5: 4500715-4511086 Medicago truncatula
Medtr5g013790 0.5kb upstream 0.5kb upstream 500 false chr5: 4500715-4501214 Medicago truncatula
Medtr5g013790 0.5kb downstream 0.5kb downstream 10372 true chr5: 4501215-4511586 Medicago truncatula
Medtr5g013790 0.5kb downstream 0.5kb downstream 500 false chr5: 4511087-4511586 Medicago truncatula
Medtr5g013790 1.0kb upstream 1.0kb upstream 10872 true chr5: 4500215-4511086 Medicago truncatula
Medtr5g013790 1.0kb upstream 1.0kb upstream 1000 false chr5: 4500215-4501214 Medicago truncatula
Medtr5g013790 1.0kb downstream 1.0kb downstream 10872 true chr5: 4501215-4512086 Medicago truncatula
Medtr5g013790 1.0kb downstream 1.0kb downstream 1000 false chr5: 4511087-4512086 Medicago truncatula
Medtr5g013790 2.0kb upstream 2.0kb upstream 11872 true chr5: 4499215-4511086 Medicago truncatula
Medtr5g013790 2.0kb upstream 2.0kb upstream 2000 false chr5: 4499215-4501214 Medicago truncatula
Medtr5g013790 2.0kb downstream 2.0kb downstream 11872 true chr5: 4501215-4513086 Medicago truncatula
Medtr5g013790 2.0kb downstream 2.0kb downstream 2000 false chr5: 4511087-4513086 Medicago truncatula
Medtr5g013790 5.0kb upstream 5.0kb upstream 14872 true chr5: 4496215-4511086 Medicago truncatula
Medtr5g013790 5.0kb upstream 5.0kb upstream 5000 false chr5: 4496215-4501214 Medicago truncatula
Medtr5g013790 5.0kb downstream 5.0kb downstream 14872 true chr5: 4501215-4516086 Medicago truncatula
Medtr5g013790 5.0kb downstream 5.0kb downstream 5000 false chr5: 4511087-4516086 Medicago truncatula
Medtr5g013790 10.0kb upstream 10.0kb upstream 19872 true chr5: 4491215-4511086 Medicago truncatula
Medtr5g013790 10.0kb upstream 10.0kb upstream 10000 false chr5: 4491215-4501214 Medicago truncatula
Medtr5g013790 10.0kb downstream 10.0kb downstream 19872 true chr5: 4501215-4521086 Medicago truncatula
Medtr5g013790 10.0kb downstream 10.0kb downstream 10000 false chr5: 4511087-4521086 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122787777 5272 Eudicot View MSA
122310749 5265 Fabidae View MSA
124064687 5270 Rosid View MSA
123747145 5271 Pentapetalae View MSA
122044816 5273 Angiosperm View MSA
121344887 5274 Embryophyte View MSA
123425765 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.79        
cufflinks 24.462     High High
cufflinks 18.294     High  
cufflinks 4.249        
cufflinks 24.665     High High
cufflinks 2.163       Low
cufflinks 2.656        
cufflinks 22.839     High High
cufflinks 3.073        

0 Strain