Gene : Medtr5g007520 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12214 - GC-RICH SEQUENCE DNA-BINDING FACTOR Description:  GC-rich sequence DNA-binding factor, putative
Genomic Order:  219 Name:  ? Medtr5g007520
Secondary Identifier:  ? PAC:31087547
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g007520 0.5kb upstream 0.5kb upstream 7398 true chr5: 1387429-1394826 Medicago truncatula
Medtr5g007520 0.5kb upstream 0.5kb upstream 500 false chr5: 1394327-1394826 Medicago truncatula
Medtr5g007520 0.5kb downstream 0.5kb downstream 7398 true chr5: 1386929-1394326 Medicago truncatula
Medtr5g007520 0.5kb downstream 0.5kb downstream 500 false chr5: 1386929-1387428 Medicago truncatula
Medtr5g007520 1.0kb upstream 1.0kb upstream 7898 true chr5: 1387429-1395326 Medicago truncatula
Medtr5g007520 1.0kb upstream 1.0kb upstream 1000 false chr5: 1394327-1395326 Medicago truncatula
Medtr5g007520 1.0kb downstream 1.0kb downstream 7898 true chr5: 1386429-1394326 Medicago truncatula
Medtr5g007520 1.0kb downstream 1.0kb downstream 1000 false chr5: 1386429-1387428 Medicago truncatula
Medtr5g007520 2.0kb upstream 2.0kb upstream 8898 true chr5: 1387429-1396326 Medicago truncatula
Medtr5g007520 2.0kb upstream 2.0kb upstream 2000 false chr5: 1394327-1396326 Medicago truncatula
Medtr5g007520 2.0kb downstream 2.0kb downstream 8898 true chr5: 1385429-1394326 Medicago truncatula
Medtr5g007520 2.0kb downstream 2.0kb downstream 2000 false chr5: 1385429-1387428 Medicago truncatula
Medtr5g007520 5.0kb upstream 5.0kb upstream 11898 true chr5: 1387429-1399326 Medicago truncatula
Medtr5g007520 5.0kb upstream 5.0kb upstream 5000 false chr5: 1394327-1399326 Medicago truncatula
Medtr5g007520 5.0kb downstream 5.0kb downstream 11898 true chr5: 1382429-1394326 Medicago truncatula
Medtr5g007520 5.0kb downstream 5.0kb downstream 5000 false chr5: 1382429-1387428 Medicago truncatula
Medtr5g007520 10.0kb upstream 10.0kb upstream 16898 true chr5: 1387429-1404326 Medicago truncatula
Medtr5g007520 10.0kb upstream 10.0kb upstream 10000 false chr5: 1394327-1404326 Medicago truncatula
Medtr5g007520 10.0kb downstream 10.0kb downstream 16898 true chr5: 1377429-1394326 Medicago truncatula
Medtr5g007520 10.0kb downstream 10.0kb downstream 10000 false chr5: 1377429-1387428 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301094 5265 Fabidae View MSA
124050258 5270 Rosid View MSA
123739930 5271 Pentapetalae View MSA
122786850 5272 Eudicot View MSA
122041525 5273 Angiosperm View MSA
121344112 5274 Embryophyte View MSA
123425379 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.044        
cufflinks 4.531        
cufflinks 5.373        
cufflinks 2.62       Low
cufflinks 5.438        
cufflinks 1.557       Low
cufflinks 4.892        
cufflinks 4.89        
cufflinks 4.145        

0 Strain