Gene : Medtr5g009240 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13513 - E3 UBIQUITIN-PROTEIN LIGASE UBR7 Description:  E3 ubiquitin-protein ligase
Genomic Order:  356 Name:  ? Medtr5g009240
Secondary Identifier:  ? PAC:31085238
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g009240 0.5kb upstream 0.5kb upstream 5424 true chr5: 2160393-2165816 Medicago truncatula
Medtr5g009240 0.5kb upstream 0.5kb upstream 500 false chr5: 2160393-2160892 Medicago truncatula
Medtr5g009240 0.5kb downstream 0.5kb downstream 5424 true chr5: 2160893-2166316 Medicago truncatula
Medtr5g009240 0.5kb downstream 0.5kb downstream 500 false chr5: 2165817-2166316 Medicago truncatula
Medtr5g009240 1.0kb upstream 1.0kb upstream 5924 true chr5: 2159893-2165816 Medicago truncatula
Medtr5g009240 1.0kb upstream 1.0kb upstream 1000 false chr5: 2159893-2160892 Medicago truncatula
Medtr5g009240 1.0kb downstream 1.0kb downstream 5924 true chr5: 2160893-2166816 Medicago truncatula
Medtr5g009240 1.0kb downstream 1.0kb downstream 1000 false chr5: 2165817-2166816 Medicago truncatula
Medtr5g009240 2.0kb upstream 2.0kb upstream 6924 true chr5: 2158893-2165816 Medicago truncatula
Medtr5g009240 2.0kb upstream 2.0kb upstream 2000 false chr5: 2158893-2160892 Medicago truncatula
Medtr5g009240 2.0kb downstream 2.0kb downstream 6924 true chr5: 2160893-2167816 Medicago truncatula
Medtr5g009240 2.0kb downstream 2.0kb downstream 2000 false chr5: 2165817-2167816 Medicago truncatula
Medtr5g009240 5.0kb upstream 5.0kb upstream 9924 true chr5: 2155893-2165816 Medicago truncatula
Medtr5g009240 5.0kb upstream 5.0kb upstream 5000 false chr5: 2155893-2160892 Medicago truncatula
Medtr5g009240 5.0kb downstream 5.0kb downstream 9924 true chr5: 2160893-2170816 Medicago truncatula
Medtr5g009240 5.0kb downstream 5.0kb downstream 5000 false chr5: 2165817-2170816 Medicago truncatula
Medtr5g009240 10.0kb upstream 10.0kb upstream 14924 true chr5: 2150893-2165816 Medicago truncatula
Medtr5g009240 10.0kb upstream 10.0kb upstream 10000 false chr5: 2150893-2160892 Medicago truncatula
Medtr5g009240 10.0kb downstream 10.0kb downstream 14924 true chr5: 2160893-2175816 Medicago truncatula
Medtr5g009240 10.0kb downstream 10.0kb downstream 10000 false chr5: 2165817-2175816 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301887 5265 Fabidae View MSA
124062977 5270 Rosid View MSA
123737200 5271 Pentapetalae View MSA
122790604 5272 Eudicot View MSA
122043185 5273 Angiosperm View MSA
121344097 5274 Embryophyte View MSA
123379975 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.65       High
cufflinks 3.283        
cufflinks 3.942        
cufflinks 4.154        
cufflinks 3.788        
cufflinks 2.413       Low
cufflinks 4.124        
cufflinks 3.253        
cufflinks 5.054       High

0 Strain