Gene : Medtr5g058150 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR21738:SF0 - RIBOSOMAL RNA PROCESSING PROTEIN 36 HOMOLOG Description:  ribosomal RNA processing-like protein
Genomic Order:  3120 Name:  ? Medtr5g058150
Secondary Identifier:  ? PAC:31091731
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g058150 0.5kb upstream 0.5kb upstream 6383 true chr5: 24028938-24035320 Medicago truncatula
Medtr5g058150 0.5kb upstream 0.5kb upstream 500 false chr5: 24028938-24029437 Medicago truncatula
Medtr5g058150 0.5kb downstream 0.5kb downstream 6383 true chr5: 24029438-24035820 Medicago truncatula
Medtr5g058150 0.5kb downstream 0.5kb downstream 500 false chr5: 24035321-24035820 Medicago truncatula
Medtr5g058150 1.0kb upstream 1.0kb upstream 6883 true chr5: 24028438-24035320 Medicago truncatula
Medtr5g058150 1.0kb upstream 1.0kb upstream 1000 false chr5: 24028438-24029437 Medicago truncatula
Medtr5g058150 1.0kb downstream 1.0kb downstream 6883 true chr5: 24029438-24036320 Medicago truncatula
Medtr5g058150 1.0kb downstream 1.0kb downstream 1000 false chr5: 24035321-24036320 Medicago truncatula
Medtr5g058150 2.0kb upstream 2.0kb upstream 7883 true chr5: 24027438-24035320 Medicago truncatula
Medtr5g058150 2.0kb upstream 2.0kb upstream 2000 false chr5: 24027438-24029437 Medicago truncatula
Medtr5g058150 2.0kb downstream 2.0kb downstream 7883 true chr5: 24029438-24037320 Medicago truncatula
Medtr5g058150 2.0kb downstream 2.0kb downstream 2000 false chr5: 24035321-24037320 Medicago truncatula
Medtr5g058150 5.0kb upstream 5.0kb upstream 10883 true chr5: 24024438-24035320 Medicago truncatula
Medtr5g058150 5.0kb upstream 5.0kb upstream 5000 false chr5: 24024438-24029437 Medicago truncatula
Medtr5g058150 5.0kb downstream 5.0kb downstream 10883 true chr5: 24029438-24040320 Medicago truncatula
Medtr5g058150 5.0kb downstream 5.0kb downstream 5000 false chr5: 24035321-24040320 Medicago truncatula
Medtr5g058150 10.0kb upstream 10.0kb upstream 15883 true chr5: 24019438-24035320 Medicago truncatula
Medtr5g058150 10.0kb upstream 10.0kb upstream 10000 false chr5: 24019438-24029437 Medicago truncatula
Medtr5g058150 10.0kb downstream 10.0kb downstream 15883 true chr5: 24029438-24045320 Medicago truncatula
Medtr5g058150 10.0kb downstream 10.0kb downstream 10000 false chr5: 24035321-24045320 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306415 5265 Fabidae View MSA
124065033 5270 Rosid View MSA
123748708 5271 Pentapetalae View MSA
122790262 5272 Eudicot View MSA
122043218 5273 Angiosperm View MSA
121347730 5274 Embryophyte View MSA
123428667 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.058        
cufflinks 1.223        
cufflinks 1.189        
cufflinks 0.545       Low
cufflinks 1.753       High
cufflinks 0.696       Low
cufflinks 1.025        
cufflinks 1.139        
cufflinks 0.776        

0 Strain