Gene : Medtr5g063730 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23160:SF3 - SYNAPTONEMAL COMPLEX PROTEIN 1-RELATED Description:  myosin heavy chain-like protein
Genomic Order:  3383 Name:  ? Medtr5g063730
Secondary Identifier:  ? PAC:31085079
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g063730 0.5kb upstream 0.5kb upstream 9109 true chr5: 26422943-26432051 Medicago truncatula
Medtr5g063730 0.5kb upstream 0.5kb upstream 500 false chr5: 26431552-26432051 Medicago truncatula
Medtr5g063730 0.5kb downstream 0.5kb downstream 9109 true chr5: 26422443-26431551 Medicago truncatula
Medtr5g063730 0.5kb downstream 0.5kb downstream 500 false chr5: 26422443-26422942 Medicago truncatula
Medtr5g063730 1.0kb upstream 1.0kb upstream 9609 true chr5: 26422943-26432551 Medicago truncatula
Medtr5g063730 1.0kb upstream 1.0kb upstream 1000 false chr5: 26431552-26432551 Medicago truncatula
Medtr5g063730 1.0kb downstream 1.0kb downstream 9609 true chr5: 26421943-26431551 Medicago truncatula
Medtr5g063730 1.0kb downstream 1.0kb downstream 1000 false chr5: 26421943-26422942 Medicago truncatula
Medtr5g063730 2.0kb upstream 2.0kb upstream 10609 true chr5: 26422943-26433551 Medicago truncatula
Medtr5g063730 2.0kb upstream 2.0kb upstream 2000 false chr5: 26431552-26433551 Medicago truncatula
Medtr5g063730 2.0kb downstream 2.0kb downstream 10609 true chr5: 26420943-26431551 Medicago truncatula
Medtr5g063730 2.0kb downstream 2.0kb downstream 2000 false chr5: 26420943-26422942 Medicago truncatula
Medtr5g063730 5.0kb upstream 5.0kb upstream 13609 true chr5: 26422943-26436551 Medicago truncatula
Medtr5g063730 5.0kb upstream 5.0kb upstream 5000 false chr5: 26431552-26436551 Medicago truncatula
Medtr5g063730 5.0kb downstream 5.0kb downstream 13609 true chr5: 26417943-26431551 Medicago truncatula
Medtr5g063730 5.0kb downstream 5.0kb downstream 5000 false chr5: 26417943-26422942 Medicago truncatula
Medtr5g063730 10.0kb upstream 10.0kb upstream 18609 true chr5: 26422943-26441551 Medicago truncatula
Medtr5g063730 10.0kb upstream 10.0kb upstream 10000 false chr5: 26431552-26441551 Medicago truncatula
Medtr5g063730 10.0kb downstream 10.0kb downstream 18609 true chr5: 26412943-26431551 Medicago truncatula
Medtr5g063730 10.0kb downstream 10.0kb downstream 10000 false chr5: 26412943-26422942 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302115 5265 Fabidae View MSA
124068908 5270 Rosid View MSA
123737284 5271 Pentapetalae View MSA
122789700 5272 Eudicot View MSA
122042808 5273 Angiosperm View MSA
121349481 5274 Embryophyte View MSA
123381327 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.052     Low High
cufflinks 0.012     Low  
cufflinks 0.004     Low Low
cufflinks 0.008     Low  
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.01     Low  
cufflinks 0.028     Low  

0 Strain