Gene : Medtr5g062650 M. truncatula Mt4.0v1
Defline:  (1 of 9) 3.2.1.37//3.2.1.55 - Xylan 1,4-beta-xylosidase / Xylobiase // Non-reducing end alpha-L-arabinofuranosidase / Arabinosidase Description:  glycoside hydrolase family 3 amine-terminal domain protein
Genomic Order:  3332 Name:  ? Medtr5g062650
Secondary Identifier:  ? PAC:31089904
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g062650 0.5kb upstream 0.5kb upstream 5919 true chr5: 25955697-25961615 Medicago truncatula
Medtr5g062650 0.5kb upstream 0.5kb upstream 500 false chr5: 25955697-25956196 Medicago truncatula
Medtr5g062650 0.5kb downstream 0.5kb downstream 5919 true chr5: 25956197-25962115 Medicago truncatula
Medtr5g062650 0.5kb downstream 0.5kb downstream 500 false chr5: 25961616-25962115 Medicago truncatula
Medtr5g062650 1.0kb upstream 1.0kb upstream 6419 true chr5: 25955197-25961615 Medicago truncatula
Medtr5g062650 1.0kb upstream 1.0kb upstream 1000 false chr5: 25955197-25956196 Medicago truncatula
Medtr5g062650 1.0kb downstream 1.0kb downstream 6419 true chr5: 25956197-25962615 Medicago truncatula
Medtr5g062650 1.0kb downstream 1.0kb downstream 1000 false chr5: 25961616-25962615 Medicago truncatula
Medtr5g062650 2.0kb upstream 2.0kb upstream 7419 true chr5: 25954197-25961615 Medicago truncatula
Medtr5g062650 2.0kb upstream 2.0kb upstream 2000 false chr5: 25954197-25956196 Medicago truncatula
Medtr5g062650 2.0kb downstream 2.0kb downstream 7419 true chr5: 25956197-25963615 Medicago truncatula
Medtr5g062650 2.0kb downstream 2.0kb downstream 2000 false chr5: 25961616-25963615 Medicago truncatula
Medtr5g062650 5.0kb upstream 5.0kb upstream 10419 true chr5: 25951197-25961615 Medicago truncatula
Medtr5g062650 5.0kb upstream 5.0kb upstream 5000 false chr5: 25951197-25956196 Medicago truncatula
Medtr5g062650 5.0kb downstream 5.0kb downstream 10419 true chr5: 25956197-25966615 Medicago truncatula
Medtr5g062650 5.0kb downstream 5.0kb downstream 5000 false chr5: 25961616-25966615 Medicago truncatula
Medtr5g062650 10.0kb upstream 10.0kb upstream 15419 true chr5: 25946197-25961615 Medicago truncatula
Medtr5g062650 10.0kb upstream 10.0kb upstream 10000 false chr5: 25946197-25956196 Medicago truncatula
Medtr5g062650 10.0kb downstream 10.0kb downstream 15419 true chr5: 25956197-25971615 Medicago truncatula
Medtr5g062650 10.0kb downstream 10.0kb downstream 10000 false chr5: 25961616-25971615 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309781 5265 Fabidae View MSA
124074265 5270 Rosid View MSA
123741935 5271 Pentapetalae View MSA
122794442 5272 Eudicot View MSA
122048510 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.138       High
cufflinks 0.016     Low  
cufflinks 0.029     Low  
cufflinks 0.004     Low Low
cufflinks 0.075       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.027     Low  
cufflinks 0.007     Low  

0 Strain