Gene : Medtr5g064120 M. truncatula Mt4.0v1
Defline:  (1 of 5) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Description:  RNA-binding (RRM/RBD/RNP motif) family protein
Genomic Order:  3404 Name:  ? Medtr5g064120
Secondary Identifier:  ? PAC:31088514
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g064120 0.5kb upstream 0.5kb upstream 6275 true chr5: 26612434-26618708 Medicago truncatula
Medtr5g064120 0.5kb upstream 0.5kb upstream 500 false chr5: 26612434-26612933 Medicago truncatula
Medtr5g064120 0.5kb downstream 0.5kb downstream 6275 true chr5: 26612934-26619208 Medicago truncatula
Medtr5g064120 0.5kb downstream 0.5kb downstream 500 false chr5: 26618709-26619208 Medicago truncatula
Medtr5g064120 1.0kb upstream 1.0kb upstream 6775 true chr5: 26611934-26618708 Medicago truncatula
Medtr5g064120 1.0kb upstream 1.0kb upstream 1000 false chr5: 26611934-26612933 Medicago truncatula
Medtr5g064120 1.0kb downstream 1.0kb downstream 6775 true chr5: 26612934-26619708 Medicago truncatula
Medtr5g064120 1.0kb downstream 1.0kb downstream 1000 false chr5: 26618709-26619708 Medicago truncatula
Medtr5g064120 2.0kb upstream 2.0kb upstream 7775 true chr5: 26610934-26618708 Medicago truncatula
Medtr5g064120 2.0kb upstream 2.0kb upstream 2000 false chr5: 26610934-26612933 Medicago truncatula
Medtr5g064120 2.0kb downstream 2.0kb downstream 7775 true chr5: 26612934-26620708 Medicago truncatula
Medtr5g064120 2.0kb downstream 2.0kb downstream 2000 false chr5: 26618709-26620708 Medicago truncatula
Medtr5g064120 5.0kb upstream 5.0kb upstream 10775 true chr5: 26607934-26618708 Medicago truncatula
Medtr5g064120 5.0kb upstream 5.0kb upstream 5000 false chr5: 26607934-26612933 Medicago truncatula
Medtr5g064120 5.0kb downstream 5.0kb downstream 10775 true chr5: 26612934-26623708 Medicago truncatula
Medtr5g064120 5.0kb downstream 5.0kb downstream 5000 false chr5: 26618709-26623708 Medicago truncatula
Medtr5g064120 10.0kb upstream 10.0kb upstream 15775 true chr5: 26602934-26618708 Medicago truncatula
Medtr5g064120 10.0kb upstream 10.0kb upstream 10000 false chr5: 26602934-26612933 Medicago truncatula
Medtr5g064120 10.0kb downstream 10.0kb downstream 15775 true chr5: 26612934-26628708 Medicago truncatula
Medtr5g064120 10.0kb downstream 10.0kb downstream 10000 false chr5: 26618709-26628708 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026442 5273 Angiosperm View MSA
122306452 5265 Fabidae View MSA
124067900 5270 Rosid View MSA
123741402 5271 Pentapetalae View MSA
122770043 5272 Eudicot View MSA
123429142 5275 Viridiplantae View MSA
121350049 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.141        
cufflinks 0.197        
cufflinks 0.499        
cufflinks 0.078       Low
cufflinks 0.182        
cufflinks 0.108     Low  
cufflinks 0.989       High
cufflinks 0.191        
cufflinks 1.592       High

0 Strain