Gene : Medtr5g066400 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR11937:SF235 - ACTIN-LIKE PROTEIN 6A Description:  actin-related protein ARP4
Genomic Order:  3558 Name:  ? Medtr5g066400
Secondary Identifier:  ? PAC:31089514
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g066400 0.5kb upstream 0.5kb upstream 14265 true chr5: 28004125-28018389 Medicago truncatula
Medtr5g066400 0.5kb upstream 0.5kb upstream 500 false chr5: 28004125-28004624 Medicago truncatula
Medtr5g066400 0.5kb downstream 0.5kb downstream 14265 true chr5: 28004625-28018889 Medicago truncatula
Medtr5g066400 0.5kb downstream 0.5kb downstream 500 false chr5: 28018390-28018889 Medicago truncatula
Medtr5g066400 1.0kb upstream 1.0kb upstream 14765 true chr5: 28003625-28018389 Medicago truncatula
Medtr5g066400 1.0kb upstream 1.0kb upstream 1000 false chr5: 28003625-28004624 Medicago truncatula
Medtr5g066400 1.0kb downstream 1.0kb downstream 14765 true chr5: 28004625-28019389 Medicago truncatula
Medtr5g066400 1.0kb downstream 1.0kb downstream 1000 false chr5: 28018390-28019389 Medicago truncatula
Medtr5g066400 2.0kb upstream 2.0kb upstream 15765 true chr5: 28002625-28018389 Medicago truncatula
Medtr5g066400 2.0kb upstream 2.0kb upstream 2000 false chr5: 28002625-28004624 Medicago truncatula
Medtr5g066400 2.0kb downstream 2.0kb downstream 15765 true chr5: 28004625-28020389 Medicago truncatula
Medtr5g066400 2.0kb downstream 2.0kb downstream 2000 false chr5: 28018390-28020389 Medicago truncatula
Medtr5g066400 5.0kb upstream 5.0kb upstream 18765 true chr5: 27999625-28018389 Medicago truncatula
Medtr5g066400 5.0kb upstream 5.0kb upstream 5000 false chr5: 27999625-28004624 Medicago truncatula
Medtr5g066400 5.0kb downstream 5.0kb downstream 18765 true chr5: 28004625-28023389 Medicago truncatula
Medtr5g066400 5.0kb downstream 5.0kb downstream 5000 false chr5: 28018390-28023389 Medicago truncatula
Medtr5g066400 10.0kb upstream 10.0kb upstream 23765 true chr5: 27994625-28018389 Medicago truncatula
Medtr5g066400 10.0kb upstream 10.0kb upstream 10000 false chr5: 27994625-28004624 Medicago truncatula
Medtr5g066400 10.0kb downstream 10.0kb downstream 23765 true chr5: 28004625-28028389 Medicago truncatula
Medtr5g066400 10.0kb downstream 10.0kb downstream 10000 false chr5: 28018390-28028389 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300268 5265 Fabidae View MSA
124063804 5270 Rosid View MSA
123743517 5271 Pentapetalae View MSA
122788412 5272 Eudicot View MSA
122043885 5273 Angiosperm View MSA
121347268 5274 Embryophyte View MSA
123426556 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.366        
cufflinks 0.46        
cufflinks 0.546        
cufflinks 0.302        
cufflinks 0.724       High
cufflinks 0.16       Low
cufflinks 0.372        
cufflinks 0.478        
cufflinks 0.404        

0 Strain