Gene : Medtr5g043710 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR14363//PTHR14363:SF13 - HEPARANASE-RELATED Description:  glycoside hydrolase family 79 amine-terminal domain protein
Genomic Order:  2622 Name:  ? Medtr5g043710
Secondary Identifier:  ? PAC:31088778
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7213 Medicago truncatula pathologic  
Mtruncatula PWY-7214 Medicago truncatula pathologic  
Mtruncatula PWY-7445 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g043710 0.5kb upstream 0.5kb upstream 4553 true chr5: 19212813-19217365 Medicago truncatula
Medtr5g043710 0.5kb upstream 0.5kb upstream 500 false chr5: 19216866-19217365 Medicago truncatula
Medtr5g043710 0.5kb downstream 0.5kb downstream 4553 true chr5: 19212313-19216865 Medicago truncatula
Medtr5g043710 0.5kb downstream 0.5kb downstream 500 false chr5: 19212313-19212812 Medicago truncatula
Medtr5g043710 1.0kb upstream 1.0kb upstream 5053 true chr5: 19212813-19217865 Medicago truncatula
Medtr5g043710 1.0kb upstream 1.0kb upstream 1000 false chr5: 19216866-19217865 Medicago truncatula
Medtr5g043710 1.0kb downstream 1.0kb downstream 5053 true chr5: 19211813-19216865 Medicago truncatula
Medtr5g043710 1.0kb downstream 1.0kb downstream 1000 false chr5: 19211813-19212812 Medicago truncatula
Medtr5g043710 2.0kb upstream 2.0kb upstream 6053 true chr5: 19212813-19218865 Medicago truncatula
Medtr5g043710 2.0kb upstream 2.0kb upstream 2000 false chr5: 19216866-19218865 Medicago truncatula
Medtr5g043710 2.0kb downstream 2.0kb downstream 6053 true chr5: 19210813-19216865 Medicago truncatula
Medtr5g043710 2.0kb downstream 2.0kb downstream 2000 false chr5: 19210813-19212812 Medicago truncatula
Medtr5g043710 5.0kb upstream 5.0kb upstream 9053 true chr5: 19212813-19221865 Medicago truncatula
Medtr5g043710 5.0kb upstream 5.0kb upstream 5000 false chr5: 19216866-19221865 Medicago truncatula
Medtr5g043710 5.0kb downstream 5.0kb downstream 9053 true chr5: 19207813-19216865 Medicago truncatula
Medtr5g043710 5.0kb downstream 5.0kb downstream 5000 false chr5: 19207813-19212812 Medicago truncatula
Medtr5g043710 10.0kb upstream 10.0kb upstream 14053 true chr5: 19212813-19226865 Medicago truncatula
Medtr5g043710 10.0kb upstream 10.0kb upstream 10000 false chr5: 19216866-19226865 Medicago truncatula
Medtr5g043710 10.0kb downstream 10.0kb downstream 14053 true chr5: 19202813-19216865 Medicago truncatula
Medtr5g043710 10.0kb downstream 10.0kb downstream 10000 false chr5: 19202813-19212812 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299185 5265 Fabidae View MSA
124070666 5270 Rosid View MSA
123745187 5271 Pentapetalae View MSA
122795641 5272 Eudicot View MSA
122049598 5273 Angiosperm View MSA
121348264 5274 Embryophyte View MSA
123380798 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain