Gene : Medtr5g043480 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF08755 - Hemimethylated DNA-binding protein YccV like (YccV-like) Description:  UvrB/uvrC domain protein
Genomic Order:  2605 Name:  ? Medtr5g043480
Secondary Identifier:  ? PAC:31085987
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g043480 0.5kb upstream 0.5kb upstream 5030 true chr5: 19112171-19117200 Medicago truncatula
Medtr5g043480 0.5kb upstream 0.5kb upstream 500 false chr5: 19116701-19117200 Medicago truncatula
Medtr5g043480 0.5kb downstream 0.5kb downstream 5030 true chr5: 19111671-19116700 Medicago truncatula
Medtr5g043480 0.5kb downstream 0.5kb downstream 500 false chr5: 19111671-19112170 Medicago truncatula
Medtr5g043480 1.0kb upstream 1.0kb upstream 5530 true chr5: 19112171-19117700 Medicago truncatula
Medtr5g043480 1.0kb upstream 1.0kb upstream 1000 false chr5: 19116701-19117700 Medicago truncatula
Medtr5g043480 1.0kb downstream 1.0kb downstream 5530 true chr5: 19111171-19116700 Medicago truncatula
Medtr5g043480 1.0kb downstream 1.0kb downstream 1000 false chr5: 19111171-19112170 Medicago truncatula
Medtr5g043480 2.0kb upstream 2.0kb upstream 6530 true chr5: 19112171-19118700 Medicago truncatula
Medtr5g043480 2.0kb upstream 2.0kb upstream 2000 false chr5: 19116701-19118700 Medicago truncatula
Medtr5g043480 2.0kb downstream 2.0kb downstream 6530 true chr5: 19110171-19116700 Medicago truncatula
Medtr5g043480 2.0kb downstream 2.0kb downstream 2000 false chr5: 19110171-19112170 Medicago truncatula
Medtr5g043480 5.0kb upstream 5.0kb upstream 9530 true chr5: 19112171-19121700 Medicago truncatula
Medtr5g043480 5.0kb upstream 5.0kb upstream 5000 false chr5: 19116701-19121700 Medicago truncatula
Medtr5g043480 5.0kb downstream 5.0kb downstream 9530 true chr5: 19107171-19116700 Medicago truncatula
Medtr5g043480 5.0kb downstream 5.0kb downstream 5000 false chr5: 19107171-19112170 Medicago truncatula
Medtr5g043480 10.0kb upstream 10.0kb upstream 14530 true chr5: 19112171-19126700 Medicago truncatula
Medtr5g043480 10.0kb upstream 10.0kb upstream 10000 false chr5: 19116701-19126700 Medicago truncatula
Medtr5g043480 10.0kb downstream 10.0kb downstream 14530 true chr5: 19102171-19116700 Medicago truncatula
Medtr5g043480 10.0kb downstream 10.0kb downstream 10000 false chr5: 19102171-19112170 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302441 5265 Fabidae View MSA
124064311 5270 Rosid View MSA
123738322 5271 Pentapetalae View MSA
122791068 5272 Eudicot View MSA
122042026 5273 Angiosperm View MSA
121345511 5274 Embryophyte View MSA
123424975 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.901        
cufflinks 2.982        
cufflinks 2.928        
cufflinks 0.471        
cufflinks 3.535       High
cufflinks 0.17       Low
cufflinks 0.662        
cufflinks 2.936        
cufflinks 0.483        

0 Strain