Gene : Medtr5g043180 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG2861 - Uncharacterized conserved protein Description:  DUF155 family protein
Genomic Order:  2589 Name:  ? Medtr5g043180
Secondary Identifier:  ? PAC:31084977
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g043180 0.5kb upstream 0.5kb upstream 6269 true chr5: 18968720-18974988 Medicago truncatula
Medtr5g043180 0.5kb upstream 0.5kb upstream 500 false chr5: 18968720-18969219 Medicago truncatula
Medtr5g043180 0.5kb downstream 0.5kb downstream 6269 true chr5: 18969220-18975488 Medicago truncatula
Medtr5g043180 0.5kb downstream 0.5kb downstream 500 false chr5: 18974989-18975488 Medicago truncatula
Medtr5g043180 1.0kb upstream 1.0kb upstream 6769 true chr5: 18968220-18974988 Medicago truncatula
Medtr5g043180 1.0kb upstream 1.0kb upstream 1000 false chr5: 18968220-18969219 Medicago truncatula
Medtr5g043180 1.0kb downstream 1.0kb downstream 6769 true chr5: 18969220-18975988 Medicago truncatula
Medtr5g043180 1.0kb downstream 1.0kb downstream 1000 false chr5: 18974989-18975988 Medicago truncatula
Medtr5g043180 2.0kb upstream 2.0kb upstream 7769 true chr5: 18967220-18974988 Medicago truncatula
Medtr5g043180 2.0kb upstream 2.0kb upstream 2000 false chr5: 18967220-18969219 Medicago truncatula
Medtr5g043180 2.0kb downstream 2.0kb downstream 7769 true chr5: 18969220-18976988 Medicago truncatula
Medtr5g043180 2.0kb downstream 2.0kb downstream 2000 false chr5: 18974989-18976988 Medicago truncatula
Medtr5g043180 5.0kb upstream 5.0kb upstream 10769 true chr5: 18964220-18974988 Medicago truncatula
Medtr5g043180 5.0kb upstream 5.0kb upstream 5000 false chr5: 18964220-18969219 Medicago truncatula
Medtr5g043180 5.0kb downstream 5.0kb downstream 10769 true chr5: 18969220-18979988 Medicago truncatula
Medtr5g043180 5.0kb downstream 5.0kb downstream 5000 false chr5: 18974989-18979988 Medicago truncatula
Medtr5g043180 10.0kb upstream 10.0kb upstream 15769 true chr5: 18959220-18974988 Medicago truncatula
Medtr5g043180 10.0kb upstream 10.0kb upstream 10000 false chr5: 18959220-18969219 Medicago truncatula
Medtr5g043180 10.0kb downstream 10.0kb downstream 15769 true chr5: 18969220-18984988 Medicago truncatula
Medtr5g043180 10.0kb downstream 10.0kb downstream 10000 false chr5: 18974989-18984988 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309000 5265 Fabidae View MSA
124062817 5270 Rosid View MSA
123736461 5271 Pentapetalae View MSA
122793751 5272 Eudicot View MSA
122049047 5273 Angiosperm View MSA
121345242 5274 Embryophyte View MSA
123425933 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.098       High
cufflinks 3.036        
cufflinks 2.703        
cufflinks 1.42       Low
cufflinks 2.989        
cufflinks 1.151       Low
cufflinks 3.355        
cufflinks 2.516        
cufflinks 1.901        

0 Strain