Gene : Medtr5g043110 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21321:SF1 - EXOSOME COMPLEX COMPONENT RRP40 Description:  exosome complex exonuclease RRP40
Genomic Order:  2586 Name:  ? Medtr5g043110
Secondary Identifier:  ? PAC:31091406
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g043110 0.5kb upstream 0.5kb upstream 5438 true chr5: 18943138-18948575 Medicago truncatula
Medtr5g043110 0.5kb upstream 0.5kb upstream 500 false chr5: 18943138-18943637 Medicago truncatula
Medtr5g043110 0.5kb downstream 0.5kb downstream 5438 true chr5: 18943638-18949075 Medicago truncatula
Medtr5g043110 0.5kb downstream 0.5kb downstream 500 false chr5: 18948576-18949075 Medicago truncatula
Medtr5g043110 1.0kb upstream 1.0kb upstream 5938 true chr5: 18942638-18948575 Medicago truncatula
Medtr5g043110 1.0kb upstream 1.0kb upstream 1000 false chr5: 18942638-18943637 Medicago truncatula
Medtr5g043110 1.0kb downstream 1.0kb downstream 5938 true chr5: 18943638-18949575 Medicago truncatula
Medtr5g043110 1.0kb downstream 1.0kb downstream 1000 false chr5: 18948576-18949575 Medicago truncatula
Medtr5g043110 2.0kb upstream 2.0kb upstream 6938 true chr5: 18941638-18948575 Medicago truncatula
Medtr5g043110 2.0kb upstream 2.0kb upstream 2000 false chr5: 18941638-18943637 Medicago truncatula
Medtr5g043110 2.0kb downstream 2.0kb downstream 6938 true chr5: 18943638-18950575 Medicago truncatula
Medtr5g043110 2.0kb downstream 2.0kb downstream 2000 false chr5: 18948576-18950575 Medicago truncatula
Medtr5g043110 5.0kb upstream 5.0kb upstream 9938 true chr5: 18938638-18948575 Medicago truncatula
Medtr5g043110 5.0kb upstream 5.0kb upstream 5000 false chr5: 18938638-18943637 Medicago truncatula
Medtr5g043110 5.0kb downstream 5.0kb downstream 9938 true chr5: 18943638-18953575 Medicago truncatula
Medtr5g043110 5.0kb downstream 5.0kb downstream 5000 false chr5: 18948576-18953575 Medicago truncatula
Medtr5g043110 10.0kb upstream 10.0kb upstream 14938 true chr5: 18933638-18948575 Medicago truncatula
Medtr5g043110 10.0kb upstream 10.0kb upstream 10000 false chr5: 18933638-18943637 Medicago truncatula
Medtr5g043110 10.0kb downstream 10.0kb downstream 14938 true chr5: 18943638-18958575 Medicago truncatula
Medtr5g043110 10.0kb downstream 10.0kb downstream 10000 false chr5: 18948576-18958575 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301974 5265 Fabidae View MSA
124061201 5270 Rosid View MSA
123736741 5271 Pentapetalae View MSA
122789639 5272 Eudicot View MSA
122045630 5273 Angiosperm View MSA
121344862 5274 Embryophyte View MSA
123428759 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.781       Low
cufflinks 1.564        
cufflinks 1.166        
cufflinks 1.717        
cufflinks 2.167       High
cufflinks 0.517       Low
cufflinks 1.128        
cufflinks 1.237        
cufflinks 1.719        

0 Strain