Gene : Medtr5g042910 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31558:SF1 - F7A19.6 PROTEIN-RELATED Description:  DUF1336 family protein
Genomic Order:  2577 Name:  ? Medtr5g042910
Secondary Identifier:  ? PAC:31086731
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g042910 0.5kb upstream 0.5kb upstream 5923 true chr5: 18866488-18872410 Medicago truncatula
Medtr5g042910 0.5kb upstream 0.5kb upstream 500 false chr5: 18866488-18866987 Medicago truncatula
Medtr5g042910 0.5kb downstream 0.5kb downstream 5923 true chr5: 18866988-18872910 Medicago truncatula
Medtr5g042910 0.5kb downstream 0.5kb downstream 500 false chr5: 18872411-18872910 Medicago truncatula
Medtr5g042910 1.0kb upstream 1.0kb upstream 6423 true chr5: 18865988-18872410 Medicago truncatula
Medtr5g042910 1.0kb upstream 1.0kb upstream 1000 false chr5: 18865988-18866987 Medicago truncatula
Medtr5g042910 1.0kb downstream 1.0kb downstream 6423 true chr5: 18866988-18873410 Medicago truncatula
Medtr5g042910 1.0kb downstream 1.0kb downstream 1000 false chr5: 18872411-18873410 Medicago truncatula
Medtr5g042910 2.0kb upstream 2.0kb upstream 7423 true chr5: 18864988-18872410 Medicago truncatula
Medtr5g042910 2.0kb upstream 2.0kb upstream 2000 false chr5: 18864988-18866987 Medicago truncatula
Medtr5g042910 2.0kb downstream 2.0kb downstream 7423 true chr5: 18866988-18874410 Medicago truncatula
Medtr5g042910 2.0kb downstream 2.0kb downstream 2000 false chr5: 18872411-18874410 Medicago truncatula
Medtr5g042910 5.0kb upstream 5.0kb upstream 10423 true chr5: 18861988-18872410 Medicago truncatula
Medtr5g042910 5.0kb upstream 5.0kb upstream 5000 false chr5: 18861988-18866987 Medicago truncatula
Medtr5g042910 5.0kb downstream 5.0kb downstream 10423 true chr5: 18866988-18877410 Medicago truncatula
Medtr5g042910 5.0kb downstream 5.0kb downstream 5000 false chr5: 18872411-18877410 Medicago truncatula
Medtr5g042910 10.0kb upstream 10.0kb upstream 15423 true chr5: 18856988-18872410 Medicago truncatula
Medtr5g042910 10.0kb upstream 10.0kb upstream 10000 false chr5: 18856988-18866987 Medicago truncatula
Medtr5g042910 10.0kb downstream 10.0kb downstream 15423 true chr5: 18866988-18882410 Medicago truncatula
Medtr5g042910 10.0kb downstream 10.0kb downstream 10000 false chr5: 18872411-18882410 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302118 5265 Fabidae View MSA
124073265 5270 Rosid View MSA
123751293 5271 Pentapetalae View MSA
122789069 5272 Eudicot View MSA
122042640 5273 Angiosperm View MSA
121348788 5274 Embryophyte View MSA
123427527 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.068       High
cufflinks 0.092        
cufflinks 0.118        
cufflinks 0.035     Low Low
cufflinks 0.281        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low Low
cufflinks 0.2        
cufflinks 0.111        

0 Strain