Gene : Medtr5g053260 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  2914
Name:  ? Medtr5g053260 Secondary Identifier:  ? PAC:31085356
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g053260 0.5kb upstream 0.5kb upstream 8055 true chr5: 21949515-21957569 Medicago truncatula
Medtr5g053260 0.5kb upstream 0.5kb upstream 500 false chr5: 21949515-21950014 Medicago truncatula
Medtr5g053260 0.5kb downstream 0.5kb downstream 8055 true chr5: 21950015-21958069 Medicago truncatula
Medtr5g053260 0.5kb downstream 0.5kb downstream 500 false chr5: 21957570-21958069 Medicago truncatula
Medtr5g053260 1.0kb upstream 1.0kb upstream 8555 true chr5: 21949015-21957569 Medicago truncatula
Medtr5g053260 1.0kb upstream 1.0kb upstream 1000 false chr5: 21949015-21950014 Medicago truncatula
Medtr5g053260 1.0kb downstream 1.0kb downstream 8555 true chr5: 21950015-21958569 Medicago truncatula
Medtr5g053260 1.0kb downstream 1.0kb downstream 1000 false chr5: 21957570-21958569 Medicago truncatula
Medtr5g053260 2.0kb upstream 2.0kb upstream 9555 true chr5: 21948015-21957569 Medicago truncatula
Medtr5g053260 2.0kb upstream 2.0kb upstream 2000 false chr5: 21948015-21950014 Medicago truncatula
Medtr5g053260 2.0kb downstream 2.0kb downstream 9555 true chr5: 21950015-21959569 Medicago truncatula
Medtr5g053260 2.0kb downstream 2.0kb downstream 2000 false chr5: 21957570-21959569 Medicago truncatula
Medtr5g053260 5.0kb upstream 5.0kb upstream 12555 true chr5: 21945015-21957569 Medicago truncatula
Medtr5g053260 5.0kb upstream 5.0kb upstream 5000 false chr5: 21945015-21950014 Medicago truncatula
Medtr5g053260 5.0kb downstream 5.0kb downstream 12555 true chr5: 21950015-21962569 Medicago truncatula
Medtr5g053260 5.0kb downstream 5.0kb downstream 5000 false chr5: 21957570-21962569 Medicago truncatula
Medtr5g053260 10.0kb upstream 10.0kb upstream 17555 true chr5: 21940015-21957569 Medicago truncatula
Medtr5g053260 10.0kb upstream 10.0kb upstream 10000 false chr5: 21940015-21950014 Medicago truncatula
Medtr5g053260 10.0kb downstream 10.0kb downstream 17555 true chr5: 21950015-21967569 Medicago truncatula
Medtr5g053260 10.0kb downstream 10.0kb downstream 10000 false chr5: 21957570-21967569 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041383 5273 Angiosperm View MSA
122303794 5265 Fabidae View MSA
124066424 5270 Rosid View MSA
123737499 5271 Pentapetalae View MSA
122793809 5272 Eudicot View MSA
121350545 5274 Embryophyte View MSA
123381784 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.716        
cufflinks 1.571        
cufflinks 1.17        
cufflinks 0.234       Low
cufflinks 1.94       High
cufflinks 0.191       Low
cufflinks 0.316        
cufflinks 1.524        
cufflinks 0.26        

0 Strain