Gene : Medtr5g047890 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31614:SF15 - ARABINOGALACTAN PROTEIN 30-RELATED Description:  pollen Ole e I family allergens
Genomic Order:  2821 Name:  ? Medtr5g047890
Secondary Identifier:  ? PAC:31087165
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g047890 0.5kb upstream 0.5kb upstream 1858 true chr5: 20963320-20965177 Medicago truncatula
Medtr5g047890 0.5kb upstream 0.5kb upstream 500 false chr5: 20963320-20963819 Medicago truncatula
Medtr5g047890 0.5kb downstream 0.5kb downstream 1858 true chr5: 20963820-20965677 Medicago truncatula
Medtr5g047890 0.5kb downstream 0.5kb downstream 500 false chr5: 20965178-20965677 Medicago truncatula
Medtr5g047890 1.0kb upstream 1.0kb upstream 2358 true chr5: 20962820-20965177 Medicago truncatula
Medtr5g047890 1.0kb upstream 1.0kb upstream 1000 false chr5: 20962820-20963819 Medicago truncatula
Medtr5g047890 1.0kb downstream 1.0kb downstream 2358 true chr5: 20963820-20966177 Medicago truncatula
Medtr5g047890 1.0kb downstream 1.0kb downstream 1000 false chr5: 20965178-20966177 Medicago truncatula
Medtr5g047890 2.0kb upstream 2.0kb upstream 3358 true chr5: 20961820-20965177 Medicago truncatula
Medtr5g047890 2.0kb upstream 2.0kb upstream 2000 false chr5: 20961820-20963819 Medicago truncatula
Medtr5g047890 2.0kb downstream 2.0kb downstream 3358 true chr5: 20963820-20967177 Medicago truncatula
Medtr5g047890 2.0kb downstream 2.0kb downstream 2000 false chr5: 20965178-20967177 Medicago truncatula
Medtr5g047890 5.0kb upstream 5.0kb upstream 6358 true chr5: 20958820-20965177 Medicago truncatula
Medtr5g047890 5.0kb upstream 5.0kb upstream 5000 false chr5: 20958820-20963819 Medicago truncatula
Medtr5g047890 5.0kb downstream 5.0kb downstream 6358 true chr5: 20963820-20970177 Medicago truncatula
Medtr5g047890 5.0kb downstream 5.0kb downstream 5000 false chr5: 20965178-20970177 Medicago truncatula
Medtr5g047890 10.0kb upstream 10.0kb upstream 11358 true chr5: 20953820-20965177 Medicago truncatula
Medtr5g047890 10.0kb upstream 10.0kb upstream 10000 false chr5: 20953820-20963819 Medicago truncatula
Medtr5g047890 10.0kb downstream 10.0kb downstream 11358 true chr5: 20963820-20975177 Medicago truncatula
Medtr5g047890 10.0kb downstream 10.0kb downstream 10000 false chr5: 20965178-20975177 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315534 5265 Fabidae View MSA
124066868 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  

0 Strain