Gene : Medtr5g055000 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11654:SF178 - PROTEIN NRT1/ PTR FAMILY 3.1 Description:  peptide/nitrate transporter
Genomic Order:  2986 Name:  ? Medtr5g055000
Secondary Identifier:  ? PAC:31091257
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g055000 0.5kb upstream 0.5kb upstream 7009 true chr5: 22654485-22661493 Medicago truncatula
Medtr5g055000 0.5kb upstream 0.5kb upstream 500 false chr5: 22654485-22654984 Medicago truncatula
Medtr5g055000 0.5kb downstream 0.5kb downstream 7009 true chr5: 22654985-22661993 Medicago truncatula
Medtr5g055000 0.5kb downstream 0.5kb downstream 500 false chr5: 22661494-22661993 Medicago truncatula
Medtr5g055000 1.0kb upstream 1.0kb upstream 7509 true chr5: 22653985-22661493 Medicago truncatula
Medtr5g055000 1.0kb upstream 1.0kb upstream 1000 false chr5: 22653985-22654984 Medicago truncatula
Medtr5g055000 1.0kb downstream 1.0kb downstream 7509 true chr5: 22654985-22662493 Medicago truncatula
Medtr5g055000 1.0kb downstream 1.0kb downstream 1000 false chr5: 22661494-22662493 Medicago truncatula
Medtr5g055000 2.0kb upstream 2.0kb upstream 8509 true chr5: 22652985-22661493 Medicago truncatula
Medtr5g055000 2.0kb upstream 2.0kb upstream 2000 false chr5: 22652985-22654984 Medicago truncatula
Medtr5g055000 2.0kb downstream 2.0kb downstream 8509 true chr5: 22654985-22663493 Medicago truncatula
Medtr5g055000 2.0kb downstream 2.0kb downstream 2000 false chr5: 22661494-22663493 Medicago truncatula
Medtr5g055000 5.0kb upstream 5.0kb upstream 11509 true chr5: 22649985-22661493 Medicago truncatula
Medtr5g055000 5.0kb upstream 5.0kb upstream 5000 false chr5: 22649985-22654984 Medicago truncatula
Medtr5g055000 5.0kb downstream 5.0kb downstream 11509 true chr5: 22654985-22666493 Medicago truncatula
Medtr5g055000 5.0kb downstream 5.0kb downstream 5000 false chr5: 22661494-22666493 Medicago truncatula
Medtr5g055000 10.0kb upstream 10.0kb upstream 16509 true chr5: 22644985-22661493 Medicago truncatula
Medtr5g055000 10.0kb upstream 10.0kb upstream 10000 false chr5: 22644985-22654984 Medicago truncatula
Medtr5g055000 10.0kb downstream 10.0kb downstream 16509 true chr5: 22654985-22671493 Medicago truncatula
Medtr5g055000 10.0kb downstream 10.0kb downstream 10000 false chr5: 22661494-22671493 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302346 5265 Fabidae View MSA
124070259 5270 Rosid View MSA
123749052 5271 Pentapetalae View MSA
122793607 5272 Eudicot View MSA
122044547 5273 Angiosperm View MSA
121351267 5274 Embryophyte View MSA
123382085 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.671        
cufflinks 82.792     High High
cufflinks 25.137     High  
cufflinks 0.198       Low
cufflinks 40.59     High  
cufflinks 0.445        
cufflinks 0.429        
cufflinks 40.95     High  
cufflinks 0.364        

0 Strain