Gene : Medtr5g035090 M. truncatula Mt4.0v1
Defline:  (1 of 10) PTHR32285:SF57 - PROTEIN ALTERED XYLOGLUCAN 4 Description:  Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein
Genomic Order:  2119 Name:  ? Medtr5g035090
Secondary Identifier:  ? PAC:31088660
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g035090 0.5kb upstream 0.5kb upstream 2080 true chr5: 15265170-15267249 Medicago truncatula
Medtr5g035090 0.5kb upstream 0.5kb upstream 500 false chr5: 15266750-15267249 Medicago truncatula
Medtr5g035090 0.5kb downstream 0.5kb downstream 2080 true chr5: 15264670-15266749 Medicago truncatula
Medtr5g035090 0.5kb downstream 0.5kb downstream 500 false chr5: 15264670-15265169 Medicago truncatula
Medtr5g035090 1.0kb upstream 1.0kb upstream 2580 true chr5: 15265170-15267749 Medicago truncatula
Medtr5g035090 1.0kb upstream 1.0kb upstream 1000 false chr5: 15266750-15267749 Medicago truncatula
Medtr5g035090 1.0kb downstream 1.0kb downstream 2580 true chr5: 15264170-15266749 Medicago truncatula
Medtr5g035090 1.0kb downstream 1.0kb downstream 1000 false chr5: 15264170-15265169 Medicago truncatula
Medtr5g035090 2.0kb upstream 2.0kb upstream 3580 true chr5: 15265170-15268749 Medicago truncatula
Medtr5g035090 2.0kb upstream 2.0kb upstream 2000 false chr5: 15266750-15268749 Medicago truncatula
Medtr5g035090 2.0kb downstream 2.0kb downstream 3580 true chr5: 15263170-15266749 Medicago truncatula
Medtr5g035090 2.0kb downstream 2.0kb downstream 2000 false chr5: 15263170-15265169 Medicago truncatula
Medtr5g035090 5.0kb upstream 5.0kb upstream 6580 true chr5: 15265170-15271749 Medicago truncatula
Medtr5g035090 5.0kb upstream 5.0kb upstream 5000 false chr5: 15266750-15271749 Medicago truncatula
Medtr5g035090 5.0kb downstream 5.0kb downstream 6580 true chr5: 15260170-15266749 Medicago truncatula
Medtr5g035090 5.0kb downstream 5.0kb downstream 5000 false chr5: 15260170-15265169 Medicago truncatula
Medtr5g035090 10.0kb upstream 10.0kb upstream 11580 true chr5: 15265170-15276749 Medicago truncatula
Medtr5g035090 10.0kb upstream 10.0kb upstream 10000 false chr5: 15266750-15276749 Medicago truncatula
Medtr5g035090 10.0kb downstream 10.0kb downstream 11580 true chr5: 15255170-15266749 Medicago truncatula
Medtr5g035090 10.0kb downstream 10.0kb downstream 10000 false chr5: 15255170-15265169 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122288550 5265 Fabidae View MSA
124028790 5270 Rosid View MSA
123750797 5271 Pentapetalae View MSA
122786909 5272 Eudicot View MSA
122044387 5273 Angiosperm View MSA
121310287 5274 Embryophyte View MSA
123347814 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.467        
cufflinks 0.125        
cufflinks 0.062     Low Low
cufflinks 0.091        
cufflinks 0.186        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.936       High
cufflinks 0.099        
cufflinks 0.427        

0 Strain