Gene : Medtr5g036670 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF08295 - Sin3 family co-repressor (Sin3_corepress) Description:  paired amphipathic helix SIN3-like protein
Genomic Order:  2220 Name:  ? Medtr5g036670
Secondary Identifier:  ? PAC:31089081
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g036670 0.5kb upstream 0.5kb upstream 15061 true chr5: 16020987-16036047 Medicago truncatula
Medtr5g036670 0.5kb upstream 0.5kb upstream 500 false chr5: 16035548-16036047 Medicago truncatula
Medtr5g036670 0.5kb downstream 0.5kb downstream 15061 true chr5: 16020487-16035547 Medicago truncatula
Medtr5g036670 0.5kb downstream 0.5kb downstream 500 false chr5: 16020487-16020986 Medicago truncatula
Medtr5g036670 1.0kb upstream 1.0kb upstream 15561 true chr5: 16020987-16036547 Medicago truncatula
Medtr5g036670 1.0kb upstream 1.0kb upstream 1000 false chr5: 16035548-16036547 Medicago truncatula
Medtr5g036670 1.0kb downstream 1.0kb downstream 15561 true chr5: 16019987-16035547 Medicago truncatula
Medtr5g036670 1.0kb downstream 1.0kb downstream 1000 false chr5: 16019987-16020986 Medicago truncatula
Medtr5g036670 2.0kb upstream 2.0kb upstream 16561 true chr5: 16020987-16037547 Medicago truncatula
Medtr5g036670 2.0kb upstream 2.0kb upstream 2000 false chr5: 16035548-16037547 Medicago truncatula
Medtr5g036670 2.0kb downstream 2.0kb downstream 16561 true chr5: 16018987-16035547 Medicago truncatula
Medtr5g036670 2.0kb downstream 2.0kb downstream 2000 false chr5: 16018987-16020986 Medicago truncatula
Medtr5g036670 5.0kb upstream 5.0kb upstream 19561 true chr5: 16020987-16040547 Medicago truncatula
Medtr5g036670 5.0kb upstream 5.0kb upstream 5000 false chr5: 16035548-16040547 Medicago truncatula
Medtr5g036670 5.0kb downstream 5.0kb downstream 19561 true chr5: 16015987-16035547 Medicago truncatula
Medtr5g036670 5.0kb downstream 5.0kb downstream 5000 false chr5: 16015987-16020986 Medicago truncatula
Medtr5g036670 10.0kb upstream 10.0kb upstream 24561 true chr5: 16020987-16045547 Medicago truncatula
Medtr5g036670 10.0kb upstream 10.0kb upstream 10000 false chr5: 16035548-16045547 Medicago truncatula
Medtr5g036670 10.0kb downstream 10.0kb downstream 24561 true chr5: 16010987-16035547 Medicago truncatula
Medtr5g036670 10.0kb downstream 10.0kb downstream 10000 false chr5: 16010987-16020986 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311868 5265 Fabidae View MSA
124067617 5270 Rosid View MSA
123752813 5271 Pentapetalae View MSA
122791038 5272 Eudicot View MSA
122047034 5273 Angiosperm View MSA
121346152 5274 Embryophyte View MSA
123428507 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.285       High
cufflinks 2.309        
cufflinks 2.324        
cufflinks 0.482       Low
cufflinks 2.956        
cufflinks 0.695       Low
cufflinks 1.45        
cufflinks 1.782        
cufflinks 1.036        

0 Strain